Gene Hlac_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0329 
Symbol 
ID7399719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp352933 
End bp353451 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content68% 
IMG OID643707391 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_002565003 
Protein GI222478766 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0779553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0229363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCG TCGTCTCCGA CACCCACTCG CGCGAGGAGT CGAAGCTGCA GGGACGGACC 
GCAGAAGCGG TCCGTGAGGC CGACGTCGTC GTTCACGCGG GTGACTTCTA CCGCGAGCCG
GTTCTCAACG CGTTCGAGTC GGCCACTCGG AGTCTGCGGG CCGTCTACGG TAACAACGAC
GACGCGGGGA TCCGCGACCG CGTCCCCGAG GTACGGACGG TGGAGTACGC CGGCGTTCGG
TTCGCGGTCA CCCACCGGCA CCGCAACGGC GACACCGGAC TCGTGATGCT CGCCCGGGAG
CGCGACGCGG ACGCGGTGAT CTGCGGGCAC AGCCACCGCC CCCGGTTCGA CGACGACGGT
GCGCTCCCGA TACTAAATCC TGGAAGTCAC GCGCAGCCGC GCGGAAACCG GCCGGCGCAC
GCCGAGCTCG AACCCGCCTC CGAGGGTGAG AGTACCCTGA ACGGACGGCT CGTCACGCCA
GATGGGCAGA TATTCGGTGA GTTCCAAATC GCGCCGTAG
 
Protein sequence
MLVVVSDTHS REESKLQGRT AEAVREADVV VHAGDFYREP VLNAFESATR SLRAVYGNND 
DAGIRDRVPE VRTVEYAGVR FAVTHRHRNG DTGLVMLARE RDADAVICGH SHRPRFDDDG
ALPILNPGSH AQPRGNRPAH AELEPASEGE STLNGRLVTP DGQIFGEFQI AP