Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2226 |
Symbol | aspS |
ID | 4709184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2439816 |
End bp | 2441669 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639856702 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001003792 |
Protein GI | 121999005 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.544329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCCCCC CCGGGGGCGT GCTTACCATT GCCACCCTTT GGCCCCACCT ACCCAATCCG GAATCAACCA TGCGTAGTCA CTACTGCGGC GAGATCTGCG AATCCCACCT GGATACCGAA GTCACTCTGT GCGGCTGGGT GCACCGGCGG CGCGATCACG GCGGCATCAT CTTCATCGAC CTGCGCGATC GGGCCGGTCT GGTGCAGGTG GTGGTCGATC CGGACACCGA AGAGGCGTTC GCCGCCGCCG ACCGCGCGCG GAACGAGTAC GTCCTGCGCA TCACCGGTCG GGTGCGGCAC CGGCCGGAGG GTACCGAAAA CCCGGATCTG CACTCCGGGC GGGTCGAGGT CCTGGGCCGG GCGGTCGAGG TGCTCAACAC CGCCAAGACG CCGCCGTTCC AGCTCGATGA GCACGAGCAG GTGGGCGAGG ACGTGCGCCT GCGTCACCGC TACGTGGATC TGCGTCGCCC CGAGATGCAG CAGCGCCTGC AGCTGCGCGC CCGGGTGAGT TCGGCCATCC GCCGCCACCT GGAGGACGAG GGGTTCCTCG ACATCGAGAC GCCGATGCTG ACTCGGGCCA CGCCCGAGGG CGCCCGCGAC TATCTGGTGC CCAGCCGCAC CCACCCCGGC CGTTTCTTCG CGCTGCCGCA GTCGCCGCAG CTGTTCAAGC AGTTGCTGAT GATGGCCGGG TTCGACCGCT ACTACCAGAT CGTGCGCTGC TTCCGTGACG AGGACCTGCG CGCCGATCGC CAGCCGGAGT TCACCCAGCT CGACATGGAG GCCGCCTTCG TCGACGAAGA GGCCGTCATG GGGGTCACCG AGCGGATGCT GCGCCAGCTC TTCCGCCAGG TTCTGGGCGT CGAGCTGTCG GATCCGTTCC CGCGCATGCG TTACGCCGAA GCCATGGATC GGTACGGCTC GGACAAGCCG GACCTGCGCA TCCCGCTGGA GCTGGTCGAG GTCGGCGACC TGGTCCGCGA GGTGGATTTC AAGGTCTTCT CGGCGCCGGC CCAAGATCCG CGGGGCCGTG TGGCGGCCCT GCGTGTCCCC GGTGGGGGCG GGCTGACGCG CAAGCAGATC GACGACTACA CCGATTTCGT CGGCCGTTAC GGAGCCAAGG GCCTGGCCTA CATCAAGGTC AACGACCCGG CTCAGGGGGT CGAGGGCCTG CAGTCGCCCA TCGTCAAGTT CCTCACCGAG GAGGCCGTGC GGGGAATCCT CGAGCGCACG GGTGCCCAGG CGGGCGACGT GGTCTTCTTT GGCGCCGATC GGGCCAGCGT GGTCAACGAC GCCCTGGGGG CATTGCGCGT GCGCATCGGC CACGACATGG GGCTGGTCGA GGACGCCTGG CGGCCGCTGT GGGTGGTCGA TTTCCCGATG TTCGAGTACG ACGAGAAGGA CGGGCGGCTC TACTCCCTGC ACCATCCGTT TACTGCCCCG TGCGTACAGG ACCCCGCCGA GCTTCAGCAG CAGGACGCCG AGGCCCTGGT CTCGCGAGCG TACGACTGTG TGCTCAACGG CGTTGAACTC GGCGGCGGGT CGATCCGTAT CCACGATCCC GACATGCAGC AGGCCGTCTT CGGGGTGCTG GGTATCGGCG AGGAGGAGGC CCGCTCCAAG TTCGGGTTCC TGCTCGACGC CCTGCAGTAC GGCTGCCCGC CCCACGGCGG TATCGCCTTC GGCATGGACC GGCTGGTGAT GCTCATGGCG GGGGCCGACT CGATTCGCGA GGTCATGGCC TTCCCCAAGA CCCAGACCGC CACCTGCATG CTCACCGAGG CGCCGGCCGA GGTGGGCGAG GCGCAGTTGC GTGAGCTGGG CATCCGCCTG CGGCGGGTCA GCGGTTCGGA GTAA
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Protein sequence | MRPPGGVLTI ATLWPHLPNP ESTMRSHYCG EICESHLDTE VTLCGWVHRR RDHGGIIFID LRDRAGLVQV VVDPDTEEAF AAADRARNEY VLRITGRVRH RPEGTENPDL HSGRVEVLGR AVEVLNTAKT PPFQLDEHEQ VGEDVRLRHR YVDLRRPEMQ QRLQLRARVS SAIRRHLEDE GFLDIETPML TRATPEGARD YLVPSRTHPG RFFALPQSPQ LFKQLLMMAG FDRYYQIVRC FRDEDLRADR QPEFTQLDME AAFVDEEAVM GVTERMLRQL FRQVLGVELS DPFPRMRYAE AMDRYGSDKP DLRIPLELVE VGDLVREVDF KVFSAPAQDP RGRVAALRVP GGGGLTRKQI DDYTDFVGRY GAKGLAYIKV NDPAQGVEGL QSPIVKFLTE EAVRGILERT GAQAGDVVFF GADRASVVND ALGALRVRIG HDMGLVEDAW RPLWVVDFPM FEYDEKDGRL YSLHHPFTAP CVQDPAELQQ QDAEALVSRA YDCVLNGVEL GGGSIRIHDP DMQQAVFGVL GIGEEEARSK FGFLLDALQY GCPPHGGIAF GMDRLVMLMA GADSIREVMA FPKTQTATCM LTEAPAEVGE AQLRELGIRL RRVSGSE
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