Gene Hhal_2226 details

Gene Information

• Locus tag: Hhal_2226
• Symbol: aspS
• ID: 4709184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 2439816
• End bp: 2441669
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639856702
• Product: aspartyl-tRNA synthetase
• Protein accession: YP_001003792
• Protein GI: 121999005
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0173] Aspartyl-tRNA synthetase
• TIGRFAM ID: [TIGR00459] aspartyl-tRNA synthetase, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.544329
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGCCCCC CCGGGGGCGT GCTTACCATT GCCACCCTTT GGCCCCACCT ACCCAATCCG 
GAATCAACCA TGCGTAGTCA CTACTGCGGC GAGATCTGCG AATCCCACCT GGATACCGAA 
GTCACTCTGT GCGGCTGGGT GCACCGGCGG CGCGATCACG GCGGCATCAT CTTCATCGAC 
CTGCGCGATC GGGCCGGTCT GGTGCAGGTG GTGGTCGATC CGGACACCGA AGAGGCGTTC 
GCCGCCGCCG ACCGCGCGCG GAACGAGTAC GTCCTGCGCA TCACCGGTCG GGTGCGGCAC 
CGGCCGGAGG GTACCGAAAA CCCGGATCTG CACTCCGGGC GGGTCGAGGT CCTGGGCCGG 
GCGGTCGAGG TGCTCAACAC CGCCAAGACG CCGCCGTTCC AGCTCGATGA GCACGAGCAG 
GTGGGCGAGG ACGTGCGCCT GCGTCACCGC TACGTGGATC TGCGTCGCCC CGAGATGCAG 
CAGCGCCTGC AGCTGCGCGC CCGGGTGAGT TCGGCCATCC GCCGCCACCT GGAGGACGAG 
GGGTTCCTCG ACATCGAGAC GCCGATGCTG ACTCGGGCCA CGCCCGAGGG CGCCCGCGAC 
TATCTGGTGC CCAGCCGCAC CCACCCCGGC CGTTTCTTCG CGCTGCCGCA GTCGCCGCAG 
CTGTTCAAGC AGTTGCTGAT GATGGCCGGG TTCGACCGCT ACTACCAGAT CGTGCGCTGC 
TTCCGTGACG AGGACCTGCG CGCCGATCGC CAGCCGGAGT TCACCCAGCT CGACATGGAG 
GCCGCCTTCG TCGACGAAGA GGCCGTCATG GGGGTCACCG AGCGGATGCT GCGCCAGCTC 
TTCCGCCAGG TTCTGGGCGT CGAGCTGTCG GATCCGTTCC CGCGCATGCG TTACGCCGAA 
GCCATGGATC GGTACGGCTC GGACAAGCCG GACCTGCGCA TCCCGCTGGA GCTGGTCGAG 
GTCGGCGACC TGGTCCGCGA GGTGGATTTC AAGGTCTTCT CGGCGCCGGC CCAAGATCCG 
CGGGGCCGTG TGGCGGCCCT GCGTGTCCCC GGTGGGGGCG GGCTGACGCG CAAGCAGATC 
GACGACTACA CCGATTTCGT CGGCCGTTAC GGAGCCAAGG GCCTGGCCTA CATCAAGGTC 
AACGACCCGG CTCAGGGGGT CGAGGGCCTG CAGTCGCCCA TCGTCAAGTT CCTCACCGAG 
GAGGCCGTGC GGGGAATCCT CGAGCGCACG GGTGCCCAGG CGGGCGACGT GGTCTTCTTT 
GGCGCCGATC GGGCCAGCGT GGTCAACGAC GCCCTGGGGG CATTGCGCGT GCGCATCGGC 
CACGACATGG GGCTGGTCGA GGACGCCTGG CGGCCGCTGT GGGTGGTCGA TTTCCCGATG 
TTCGAGTACG ACGAGAAGGA CGGGCGGCTC TACTCCCTGC ACCATCCGTT TACTGCCCCG 
TGCGTACAGG ACCCCGCCGA GCTTCAGCAG CAGGACGCCG AGGCCCTGGT CTCGCGAGCG 
TACGACTGTG TGCTCAACGG CGTTGAACTC GGCGGCGGGT CGATCCGTAT CCACGATCCC 
GACATGCAGC AGGCCGTCTT CGGGGTGCTG GGTATCGGCG AGGAGGAGGC CCGCTCCAAG 
TTCGGGTTCC TGCTCGACGC CCTGCAGTAC GGCTGCCCGC CCCACGGCGG TATCGCCTTC 
GGCATGGACC GGCTGGTGAT GCTCATGGCG GGGGCCGACT CGATTCGCGA GGTCATGGCC 
TTCCCCAAGA CCCAGACCGC CACCTGCATG CTCACCGAGG CGCCGGCCGA GGTGGGCGAG 
GCGCAGTTGC GTGAGCTGGG CATCCGCCTG CGGCGGGTCA GCGGTTCGGA GTAA 

 

Protein sequence

MRPPGGVLTI ATLWPHLPNP ESTMRSHYCG EICESHLDTE VTLCGWVHRR RDHGGIIFID 
LRDRAGLVQV VVDPDTEEAF AAADRARNEY VLRITGRVRH RPEGTENPDL HSGRVEVLGR 
AVEVLNTAKT PPFQLDEHEQ VGEDVRLRHR YVDLRRPEMQ QRLQLRARVS SAIRRHLEDE 
GFLDIETPML TRATPEGARD YLVPSRTHPG RFFALPQSPQ LFKQLLMMAG FDRYYQIVRC 
FRDEDLRADR QPEFTQLDME AAFVDEEAVM GVTERMLRQL FRQVLGVELS DPFPRMRYAE 
AMDRYGSDKP DLRIPLELVE VGDLVREVDF KVFSAPAQDP RGRVAALRVP GGGGLTRKQI 
DDYTDFVGRY GAKGLAYIKV NDPAQGVEGL QSPIVKFLTE EAVRGILERT GAQAGDVVFF 
GADRASVVND ALGALRVRIG HDMGLVEDAW RPLWVVDFPM FEYDEKDGRL YSLHHPFTAP 
CVQDPAELQQ QDAEALVSRA YDCVLNGVEL GGGSIRIHDP DMQQAVFGVL GIGEEEARSK 
FGFLLDALQY GCPPHGGIAF GMDRLVMLMA GADSIREVMA FPKTQTATCM LTEAPAEVGE 
AQLRELGIRL RRVSGSE