| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1861 |
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| Symbol | |
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| ID | 4711230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2032790 |
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| End bp | 2035543 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639856333 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001003427 |
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| Protein GI | 121998640 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.274545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGACG GCAGGGAAGC GACGACGAGG ACCGAGGGCG AGACGGCGCG CTGTTGGCAT
GCCGAGCCAG CGGATCGCGT CGCCGAACAG CTTGGTTCGG GCGGGCAGGG GCTGGATGTC
GAGGAGGCCG CGGCACGGCT AGAGAGCCAC GGGCCCAATG AGCTCCGGCC GCCGGAGCGC
GCTGGGCCCG TGGTGCGCTT CCTGCGTCAC TTCCACAACG TCCTGATCTA CATCCTGATC
GCCGCCGCGG CCGGTACTGC GCTGCTCGGC CACTGGGTCG ATACCGGTGT GATCCTGGCG
GTGGTGCTGA TCAACACCCT GATCGGCTTC TTCCAGGAGG GCAAGGCCGA ACGGGCCCTA
GACGCCATCC GGCAGATGCT CTCGCCGCAG GCGGTGGTGG TCCGCGGCGG TGAGCGTCGC
GAGGTGGACG CTGCGCAGAT CGTTCCCGGC GACGTGGTCT TCCTCCAGGC CGGGGACAAG
GTGCCGGCGG ATCTGCGGCT GTTCAACGCC AAAAACCTGC GCATCGACGA GGCCGTGTTG
ACCGGTGAGT CGGTGCCGGT GGAGAAGGGT ACCGAGGCGG TCGATGCCGC GGCGGACCTC
GGTGACCGCC GCGGCATGGC CTATTCGGGC ACCCTGGTGA CCTTCGGCCG GGGGCTGGGG
GTGGTGGTGG CCACCGGCAC GGAGACGGAG GTCGGGCGCA TCTCGCAGAT GCTCGGTGAG
GTGGACAGCC TGCAGACGCC GCTGATCCGT CAGACCGAGC AGTTCGGCCG GTGGCTGGCG
GCGATCATCG TGGTGGTGGC GGCCTTCACC TTCGCCTTCG GTTACTGGGT CCGCAGCTAC
CCGCTGGATG AGATGTTCCT GGCCGCGGTG AGCCTGGCGG TCTCGACGAT CCCCGAGGGG
CTGCCGGCCA TCCTCACCAT CGCCCTGGCC ATCGGCGTGC AGAAGATGGC CCGGCGCAAT
GCCATCATCC GGCGCCTGCC GGCGGTGGAG ACCCTCGGCT CCGTCTCGAC CATCTGCTCG
GACAAGACCG GGACGCTAAC CCGCAACGAG ATGACCGTGG CCACGCTGGT CAGCCGGCAG
CGTCGGGTCC GTGTCGACGG TGTCGGTTAT GCCCCCCATG GCGGGTTCTG TGAAGGCCAT
GAGGAGGTGT TCCCGGATCG CGATCCGGTC TTCCATCAGG CCCTGCTCTG CGCCCTGCTG
TGTAACGACG CCGAGCACTT CGAGCGCGAT GGCGAGTGGC GGTTGCAGGG CGATCCCACC
GAGGGCTCGC TGGTGGTGGC GGCGCGCAAG GCCGGTTACG ACCCGTCCGC CGAGACGGAG
CGGCGCCCGC GTCTGGATGT CATCCCTTTC GAGTCGGACC ACAAGTACAT GGCCACCCTG
CACTCCGACC ACCACGGGTG GCAGGGGATC TTTCTCAAGG GCAGTCCCGA GCGGTTGCTT
GAGCTCTGCA CCCACGAACA GACCGCGGAC GGGCCCCAGC CCCTGGATCG CGGGTGGTGG
GAGACGGCCA TGGACGATGT GGCCGCCCGG GGCGAGCGGC TCCTCGCCCT GGCTATGCAG
GAGGTGGACC CCCACCAGCA GGAGCTGACC TACGAGCAGG TCGAGGGAGG CGGATTCACC
CTGCTCGGGC TGGTCGGCAT CATCGACCCG CCCCGGGAGG AGGCCATCGC GGCGGTGGCC
CGGGCCCAGC GGGCCGGTAT CCGGGTGAAG ATGATCACCG GCGACCACCT GGCCACGGCC
CGGGCCATCG GTCAGCAGCT GGGGATCGGT CAGGCGGAGG CGGTCTCCGG GCACGAGATC
GATGCCATGG ACGGCCCCAC TCTGCAGGAG ACCGTGCGCC GGGTGGATAT CTTTGCCCGT
ACCACGCCGG AGCATAAGCT GCGTCTGGTC CAGGCCCTAC AGGCCGACGG CGGCATCTGT
GCGATGACCG GCGATGGCGT CAACGACGCC CCGGCACTCA AGCGCGCCGA TGTCGGGGTG
GCCATGGGCA ACAAGGGCAC CGAGGCGGCC AAGGAGGCCT CGGAGATGGT CCTCGCCGAT
GACAACTTCG CCTCCATCAC CCACGCCGTG GAGGAAGGGC GGGCCGTCTA CGACAACATC
CGCAAGGCCA TCCTGCACAT GCTCCCGACC AATGCCGGGC AGTCGCTGAC CATCATGATG
GCCATCCTGA TGGGCCTCGC GCTGCCGCTG ACCCCCGTGC AGGTGCTGTG GGTGAACATG
GTCACCTCGG TAACGCTGGC TATGGCGCTG GCCTTTGAGC CCGGTGAACC GGGGGTGATG
GAGCGCCCGC CGCGGGACCC CAACGCCCCC TTGCTCTCCG GTTTTATGCT CTGGCGGATC
CCCTTTGTGG CGCTGCTGCT CTGGTTGGGC ACTTTCGGCC ACTTCGTGTG GATGGAGGAG
GTCGTCGGTG CCAGCGATGA GCTGGCGCGG ACCGTAGCGA TCAACACCCT GGTTGCCGGC
CAGGCGTTCT ACCTGCTCAA CCTGCGCCTG ATCTACGACC CGATCTGGCG GGGGTGGGCA
CTGTTCCGTT CGCGGGCGAT GTGGATCGCC ATCGGGGTGC TCATCCTGCT CCAGCTCGCG
TTCACCTACG CTCCGGTGAT GCACACGCTG TTTGGCACCA CGCCGATCGG TCCGGAGGAC
TGGGCGCGGA TCCTGCTCTT CGGTCTGGCG GTTTTCGTGA TCGTCGAGCT GGAGAAGGCC
GTCGTGCGCC GGCTGCCGGG ACGGCAGCCG GCGTCGGCTG CGACGACGGG GTAA
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| Protein sequence | MDDGREATTR TEGETARCWH AEPADRVAEQ LGSGGQGLDV EEAAARLESH GPNELRPPER
AGPVVRFLRH FHNVLIYILI AAAAGTALLG HWVDTGVILA VVLINTLIGF FQEGKAERAL
DAIRQMLSPQ AVVVRGGERR EVDAAQIVPG DVVFLQAGDK VPADLRLFNA KNLRIDEAVL
TGESVPVEKG TEAVDAAADL GDRRGMAYSG TLVTFGRGLG VVVATGTETE VGRISQMLGE
VDSLQTPLIR QTEQFGRWLA AIIVVVAAFT FAFGYWVRSY PLDEMFLAAV SLAVSTIPEG
LPAILTIALA IGVQKMARRN AIIRRLPAVE TLGSVSTICS DKTGTLTRNE MTVATLVSRQ
RRVRVDGVGY APHGGFCEGH EEVFPDRDPV FHQALLCALL CNDAEHFERD GEWRLQGDPT
EGSLVVAARK AGYDPSAETE RRPRLDVIPF ESDHKYMATL HSDHHGWQGI FLKGSPERLL
ELCTHEQTAD GPQPLDRGWW ETAMDDVAAR GERLLALAMQ EVDPHQQELT YEQVEGGGFT
LLGLVGIIDP PREEAIAAVA RAQRAGIRVK MITGDHLATA RAIGQQLGIG QAEAVSGHEI
DAMDGPTLQE TVRRVDIFAR TTPEHKLRLV QALQADGGIC AMTGDGVNDA PALKRADVGV
AMGNKGTEAA KEASEMVLAD DNFASITHAV EEGRAVYDNI RKAILHMLPT NAGQSLTIMM
AILMGLALPL TPVQVLWVNM VTSVTLAMAL AFEPGEPGVM ERPPRDPNAP LLSGFMLWRI
PFVALLLWLG TFGHFVWMEE VVGASDELAR TVAINTLVAG QAFYLLNLRL IYDPIWRGWA
LFRSRAMWIA IGVLILLQLA FTYAPVMHTL FGTTPIGPED WARILLFGLA VFVIVELEKA
VVRRLPGRQP ASAATTG
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