Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0893 |
Symbol | |
ID | 4710109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 969895 |
End bp | 971319 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639855362 |
Product | tRNA-i(6)A37 thiotransferase enzyme MiaB |
Protein accession | YP_001002471 |
Protein GI | 121997684 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.188426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGAA ACCAGTCCCG TGAAGCGAGG CCAAACCGCG AGGTGGCGCA GACGGTGAGC GAGCGCGTCT ACGTAGAGAC CCAAGGCTGC CAGATGAACG ATTACGACGC CGAGCGGCTC GTCGACGTCC TGGTCAGCCA GGCCGGCGCG CGCCGGGTCG ATCGCCCCGA GGAGGCCGAC CTGCTGCTGC TCAACACCTG CTCGGTGCGG GAGAAGGCGC AGGAGAAGGT CTTCTCGCAG CTCGGTCGCT GGCGGCGCTA CAAGCAGGAC AACCCCACCG TGCTGATCGG CGTTGGTGGC TGCGTGGCCA GCCAGGAGGG GGCCGAGATC CTGCGCCGCG CCCCCTTCGT CGACCTGGTG TTCGGGCCGC AGACCCTGCA TCGCCTGCCG CAGATGCTGG CGCGCCGGCG CTCCGGGGCC AGCGCCCAGG TCGACGTCGA CTTCCCCGAG ATCGAGAAGT TCGACCACCT GCCGCAGCCG CGGGCCGAGG GGCCCACCGC CTACGTCTCG GTGATGGAGG GCTGCAGCAA GTACTGCTCC TTCTGCGTGG TGCCGTACAC CCGCGGCGAC GAGATCAGCC GGCCGGTGGC CGACGTCCTC GCCGAGGTGC GTAGCCTGGC CGAGCAGGGG GTGCGCGAGG TCAACCTGCT GGGGCAGAAC GTCAACGCCT ACGCCGGCGC CCTCGACGAC GGCGAGCGCG CCGACCTGGG GCTGCTCATC GAGGCCGTGG CGCGCATCCC GGGGATCGAC CGCATCCGCT TCACTACCTC GCACCCGGCG GAGTTCCACA GTGGGCTCAT CGACGCCTAC CGCGATGTGC CCGAGCTGGC CGACTTCCTG CACCTGCCGG TGCAGAGCGG CTCGGATCTG ATCCTCAAGC TGATGAAACG CGGCCACGAC ATCGCCGCCT ACGAGGCGCT GATCGATCAG ATTCGCGCCG TTCGCCCCGG GCTGGTGTTG GCGACGGACC TGATCGTCGG CTTCCCCGGC GAGACCGAGG CCGAGTTCGA GGAGACCCTG GCCATGGTTG ACCGCGTCGG CTTCGATGGC GGCGCCTTCA GCTTCGTCTA TAGCCCGCGG CCGGGGACAC CGGCGGCGGA GCTGCACGAC GGCGTCCCCG AGGCCGACAA GCGCGCCTGG CTGCAGCGGC TGCAGGCGCG GCTGCACGAG CAGCAGAGTG CCGCCGCCCG GGCGCTGCTC GGCACCAGGC AGTCGGTGCT GATCGATGGC CCGTCGCGGC GCGACCCGCG CGAGCTGAGC GGGCGCACCT CGGGCAACCG GGTGGTGAAC TTCCCCGGCG ATCCGTCCTG GATCGGCCGC TTTGCCGAAG TCGAGATCAC CGACGCGCGC ACCCACTCGC TCCGGGGCCG CGTCGTCTCC GTGGAGGGCC AAGCCATGCA CGCAGCAGTC GGCGCAGGCG GGTAA
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Protein sequence | MSRNQSREAR PNREVAQTVS ERVYVETQGC QMNDYDAERL VDVLVSQAGA RRVDRPEEAD LLLLNTCSVR EKAQEKVFSQ LGRWRRYKQD NPTVLIGVGG CVASQEGAEI LRRAPFVDLV FGPQTLHRLP QMLARRRSGA SAQVDVDFPE IEKFDHLPQP RAEGPTAYVS VMEGCSKYCS FCVVPYTRGD EISRPVADVL AEVRSLAEQG VREVNLLGQN VNAYAGALDD GERADLGLLI EAVARIPGID RIRFTTSHPA EFHSGLIDAY RDVPELADFL HLPVQSGSDL ILKLMKRGHD IAAYEALIDQ IRAVRPGLVL ATDLIVGFPG ETEAEFEETL AMVDRVGFDG GAFSFVYSPR PGTPAAELHD GVPEADKRAW LQRLQARLHE QQSAAARALL GTRQSVLIDG PSRRDPRELS GRTSGNRVVN FPGDPSWIGR FAEVEITDAR THSLRGRVVS VEGQAMHAAV GAGG
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