Gene Hhal_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0857 
SymbolrplD 
ID4709857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp926055 
End bp926672 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID639855316 
Product50S ribosomal protein L4 
Protein accessionYP_001002435 
Protein GI121997648 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTCA AGCTCAGTAA CGAAAAGGGC GAAGCGGCAG GCCAGCTCGA GGTCTCGGAC 
CAGGCCTTCG ACGCGCCGTT CCGCGAATCG CTCGTCCACC AGGTGGTCAC TGCCCACCTC
GCCGGGGCGC GTGCCGGGAC CAAGGCACAG AAGACCCGCA GCGAGGTGGC CGGCGGCGGC
AAGAAGCCCT GGCGTCAAAA GGGCACGGGC AACGCCCGGG CCGGCACCAT CCGCAGCCCG
CTGTGGCGCG GTGGTGGCCA GACCTTCGCG GCCAAGCCGC GGGACTTCTC CCAGAAGGTC
AACCGCAAGA TGTATCGCGG CGCCTTGCGC TCGATCCTGT CCGAGCTGGC CCGCCAGGAC
CGCCTGGTGG TCGTCAAGCA GTTGACGGTC GACGCGCCCA AGACCCGCGA GCTCAAGGCG
CGCCTGGAGG GGCTCGGCGT GCGCGAGGGC CTGATCGTGG TTGACGAGAT CGACGCCAAC
CTCGAGCTGG CGGCCCGCAA CCTGCCGCGT CTGGGCGTGG TCGACGCCGC CGGCGTCGAT
CCGGCGAGCC TGGTCGGCGC CGAGCGGGTG GTGATCACCG AGTCCGCCAT CCGCCGTGTC
GAGGAGTGGC TGTCATGA
 
Protein sequence
MELKLSNEKG EAAGQLEVSD QAFDAPFRES LVHQVVTAHL AGARAGTKAQ KTRSEVAGGG 
KKPWRQKGTG NARAGTIRSP LWRGGGQTFA AKPRDFSQKV NRKMYRGALR SILSELARQD
RLVVVKQLTV DAPKTRELKA RLEGLGVREG LIVVDEIDAN LELAARNLPR LGVVDAAGVD
PASLVGAERV VITESAIRRV EEWLS