Gene Hhal_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0564 
Symbol 
ID4710835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp638771 
End bp639454 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID639855022 
Productcytidylate kinase 
Protein accessionYP_001002152 
Protein GI121997365 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAA CCGACCTCCC CCCCGTACTC GCCATCGACG GACCCAGCGG CGCCGGCAAG 
GGCACCGTGG CCAAGGCCGT GGTGCGTGCC CTCGGCTGGC ACTTCCTGGA CAGCGGCGCG
CTCTACCGGC TGACCGGTCT CTACTGCCAG CGCCAGGGGG TGGCACCCGA CGATGCGCGG
CGTGCCGCGG AGCTGGCGGC GGTGTTGCCG GCGGAGTTCC AGGTCGCCGG CGAGGCCGAG
CGGATTCTCC TGGACGGCGA CGATGTGTCC ACCGAGCTGC GCACCGAGAC CACCGGGGCT
CTGGCCTCGC AGGTGGCCGC CCTGCAGGCG GTCCGCGACG CGCTGCTGCA ACGCCAGCGC
GATTTCCGCC GCTGCCCGGG GCTGGTGGCC GACGGGCGGG ACATGGGCAC CGTGGTCTTC
CCCGATGCGC CGGTGAAGGT CTTTCTCACT GCCAGCGCCG AGGAGCGCGC CCGGCGGCGC
TATAACCAGT TGAAGGAGCA AGGGGCCGAT GTTAGCCTTG CGAGCCTGTC GGAAGAGATA
GCCGAGCGAG ACCGACGAGA CGCCTCCCGC ACCACGGCGC CACTGAAGCC CGCCCCGGAC
GCCGAATACC TCGATACCAC TGGTCTGGAC ATCGAAACGG TGATCGAGCG GGTACTGGCA
CAGGTGCGGG GGCGCCTGGG ATAA
 
Protein sequence
MTETDLPPVL AIDGPSGAGK GTVAKAVVRA LGWHFLDSGA LYRLTGLYCQ RQGVAPDDAR 
RAAELAAVLP AEFQVAGEAE RILLDGDDVS TELRTETTGA LASQVAALQA VRDALLQRQR
DFRRCPGLVA DGRDMGTVVF PDAPVKVFLT ASAEERARRR YNQLKEQGAD VSLASLSEEI
AERDRRDASR TTAPLKPAPD AEYLDTTGLD IETVIERVLA QVRGRLG