| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0121 |
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| Symbol | |
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| ID | 4710620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 137582 |
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| End bp | 139702 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639854579 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001001717 |
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| Protein GI | 121996930 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCCGTA GTCACCTGTT GTGGACCCCC GTACTGGCTC TCGGCCTGGC CTTTTCCTCC
GTGGCACCAC TCCCCGGAGC GCCGGGTGCC GCCCCGGCGA CCGCGGGTGA GAATGGCGCA
GTACCCGGAC AGACCGAATT CGAGAAGGCG CGCGTCGTCG GCGACCTGCT CCAGCGCTAC
CACTACGGTG GCCCCGAGTC CGACGAGCAG CTCATGGAGC AGGCCACCGA GACGTACCTC
AAGCAGCTCG ACCACGGCCG CTTCTTTCTT CTGAAGGAGG ATGTCGAGGC GTTCCGCGAG
CGCATGAGCG AGCTCGACCC CGGCCAGGGC GACGCAATCC TGGAGGCCGC CTACGACCTC
CACGCCCGCT ATCGCGACCG GGTCGCCGAG CAGACGGAAT TCGCTCTGGC CCTTCTCGAG
GAAGGGTTCG GCTTCGACGG CGAAGGCCGC TTCGAACAAG ACCGCAGTGA AGCCGAATGG
GCCGCCGACC GTGAGGCCCT CGACGAGCTC TGGCGGCAGC GCGTGACCCA CGACGCACTG
ACCCTGGAGC TGGCCGAGCG CAGCACCGAG GAGATCCGCG ACAACCTCGA ACGGCGGTAC
ACCACGCTGC GCGACCGGGC CGTGGACGCG GAAAACAAGG ACATCATGGA TCAGTTCCTC
AGTGCCTGGG CGGCGGCCTA CGACCCGCAC AGCACCTTCC TCTCGCCGCA GCGCTCCGAG
GAGTTCGACA TGCAGATGTC GCTGCAGCTC GAGGGGATCG GGGCCAAGCT GACCATGGAT
CAGGACTTCA CCGAGATCGT CGAACTCATC CCCGGCGGAC CTGCCGAGCA GTCCGGTGAA
TTGCGCGAGG GCGAGCGCAT CATCGGCGTC GCCGACGGCG ATGACGGGGA GATGAAAGAC
GTCGTCGGGT GGCGGCTGGA CGAGATCGTG GACATGATTC GCGGCCCGAA GGAGTCCGTG
GTCCGACTCA ACGTGCTGCC GCCCGCCGGC GCCAGCGAGA GTTCACCGCG GGAGGTACGC
CTGGTCCGCA ACAAGGTCGA CCTGGAAGAC CAGGCCGCCC GTAAGGAGGT CATCGAGAAG
ACCAACGCCG AGGGTGAGCA GAAGCGTATC GGCGTGATCA CGATCCCCAA GTTCTACCGC
GACTTTGAGG CGGCCCACTC CGGGCAGGAC GACTTCCGCA GCACCACGCG GGACGTCGAG
CGCCTGCTCG GCGAACTGCT CGAGGACGGG GTCGACGGAC TGCTGATTGA CCTGCGCGGC
AACTCCGGCG GGGCCCTGCG CGAGGCCACC GCCCTGACCG CCCTGTTCAC CGGCGGCGGG
CCGGCGGTGC AGGTCCGCGA CTCCCGCGGC CACCCGGAGC AAGTCGGCGA GTCCAGCGGC
GATCCGGCTT ACGACGGCCC GTTGGGGGTG CTGGTGGATC GACGCAGCGC ATCGGCCTCC
GAGATCTTCG CGGCCGCGAT CAAGGATTAC GGGCGCGGGA TCGTGCTCGG CGATCAGACC
TTCGGCAAGG GCACGGTGCA GCAGATGATC GGCCTGGACA ATTACGCCAT CCCCGGAGAG
GAGCGTTCCG GTCAGCTCAA GCTGACCCTC GCCCAGTTCT ACCGGGTGAC CGGAGAGAGC
ACCCAGCTCG AGGGCGTAAA ACCGGATATC CACCTGCCGT CTGAGTTCAG CCACGAGGAG
TTCGGCGAAC GGGCCACCCG GAATCCGCTG CCGGCCACCC AGATCGACGG GCTCGACATC
ACCGTTCAGT ACGAGCTGGA GACCATCATC GACGAACTGG CCCGCCGGCA CGAGGCACGG
ATGGAGGAGA CCGAGACCTT CCGGGCCCTG GAGCGAAAAT TGGAGGCCCA ACGGGAGATC
CGCGAGGACA CCACGGTCGC CCTGAGCAAA ACGACCCGGC AGGAGGAGCA GAAGGCCCGC
GAGGAACGGC TGCTGGAGCT GCACAACGAT CGGCGCCGAG CCCACGGCAA GGATCCGGTG
GAGAGCTACG CCGACGTCGA CGCCGATGAC CTACCGGACG CCCTGCTCGA TGCCAGTGCG
GCGATCATTG CCGACTTCGC ACAGCTCCTG CGGGAGGCCG GCGACGAGGT ACTCACCGCC
GAGGCTCGCA AGGAAGGCTG A
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| Protein sequence | MARSHLLWTP VLALGLAFSS VAPLPGAPGA APATAGENGA VPGQTEFEKA RVVGDLLQRY
HYGGPESDEQ LMEQATETYL KQLDHGRFFL LKEDVEAFRE RMSELDPGQG DAILEAAYDL
HARYRDRVAE QTEFALALLE EGFGFDGEGR FEQDRSEAEW AADREALDEL WRQRVTHDAL
TLELAERSTE EIRDNLERRY TTLRDRAVDA ENKDIMDQFL SAWAAAYDPH STFLSPQRSE
EFDMQMSLQL EGIGAKLTMD QDFTEIVELI PGGPAEQSGE LREGERIIGV ADGDDGEMKD
VVGWRLDEIV DMIRGPKESV VRLNVLPPAG ASESSPREVR LVRNKVDLED QAARKEVIEK
TNAEGEQKRI GVITIPKFYR DFEAAHSGQD DFRSTTRDVE RLLGELLEDG VDGLLIDLRG
NSGGALREAT ALTALFTGGG PAVQVRDSRG HPEQVGESSG DPAYDGPLGV LVDRRSASAS
EIFAAAIKDY GRGIVLGDQT FGKGTVQQMI GLDNYAIPGE ERSGQLKLTL AQFYRVTGES
TQLEGVKPDI HLPSEFSHEE FGERATRNPL PATQIDGLDI TVQYELETII DELARRHEAR
MEETETFRAL ERKLEAQREI REDTTVALSK TTRQEEQKAR EERLLELHND RRRAHGKDPV
ESYADVDADD LPDALLDASA AIIADFAQLL REAGDEVLTA EARKEG
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