Gene Haur_5083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5083 
Symbol 
ID5737041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp101145 
End bp101738 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content48% 
IMG OID641282248 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_001547839 
Protein GI159901593 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCA ATGAACCCAA CTATTTTCTC GAAGTTACCG ACATCAAACA GGCACGAATT 
TGCCCAAGAG TCGTTTTTTA TCGCTACTGT TTACCACGGA TTCGGCCAAT AACTGGCAAA
ATGGAACTTG GAATCGAGCG CCATCGCGAG GAAGTCGGTC GGGAAGAACG GCGATCGTTG
CGCTCTTATG GGCTGACGAC TGGCGAGCGT CATTTTGATA TGTTGCTTCG CTCCGAGCGT
TATCGCTTAG TTGGGATGCT CGATTTAATT ATTATGACGG AAACCGAGTG TATCCCGATT
GAATATAAAC TGTCGGAGCG CATGCCAGGC AGCCATGTCA AAGCCCAATT AGCGGCGTAT
GCATTATTAG TGATGGAGCA ATGGCAAAAA CCGGTTCGCC GTGCATTTAG CTATTTGCTC
CCGTTGCGTA AAGCGATTGA AATTCCGTTG GGTCAACGCC AGTTGAATGA TGTCCAACGC
AGCATCGAGC ACATCCACCA GATGATTGTC CATGAAACGA TGCCGGAGCC ACCCAAACAC
CAAGCAATAT GTGTCAATTG CGAATTTCGG CGCTTTTGTA ATGATGTGCT TTAG
 
Protein sequence
MTTNEPNYFL EVTDIKQARI CPRVVFYRYC LPRIRPITGK MELGIERHRE EVGREERRSL 
RSYGLTTGER HFDMLLRSER YRLVGMLDLI IMTETECIPI EYKLSERMPG SHVKAQLAAY
ALLVMEQWQK PVRRAFSYLL PLRKAIEIPL GQRQLNDVQR SIEHIHQMIV HETMPEPPKH
QAICVNCEFR RFCNDVL