| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0096 |
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| Symbol | |
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| ID | 5731989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 122510 |
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| End bp | 125185 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641277218 |
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| Product | alpha-1,6-glucosidase, pullulanase-type |
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| Protein accession | YP_001542876 |
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| Protein GI | 159896629 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.380747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATC AATCTGTTGT TGAAGAGCAG CCCAGCGTCG GGCAGCTTGA CCGGCTGCGG
GCGTATTGGG TGCGTCGCGA TACGATTGTT TGGAATATTC ATGCGCTCCC CAATGCTCGC
TATGAGTTGC ATTATTCGCT TGATGGTTCG TTGGAGCTAA CGCCGCAGGG AATTCAGCAT
GGCACGGTTT TGCCGCTCGA ACGTGATCCC TTGGGCTTAG ATTCGACGTT GGCAGCGGCT
TTTCCGCATT TGCAGGGCTT GCCAGTCTTG CGCCTCGCCC CTGAACACCA CGACTTGGTT
GCCACAATCT TGCGTGGCCA AGTGGCGGTG CAGGCCTATC ACGCTGATGA TCAGAGTTTG
ATCGATGCGA CGGCGTTGCA AATTCCTGGG GTGCTTGATG ATTTGTATCA TTACACTGGC
GAGCTTGGGG TGAGTTTCGA TGAGCAGAAA CGCCCGATTT TGCGCTTGTG GGCACCAACC
GCTCGCTCAG TTAGTCTGTT GCTCTACGCT GATTCGGCTA AGGGAACTCG CGCGATTCGC
AGTGGGATGA TGTTTGACCC TCAGACTGGA GTTTGGAGCA TCGTTGGCAA GCCCAGTTGG
AAGAACCAGT TTTATCGATT TTTGGTCGAT GTGTTTGTGC CGAGCACTGG CCAATTTGAG
CAAAATAGCG TCACTGATCC CTATTCGCTG AGTTTATCGA CCAATAGCCA ACATTCGCAA
ATTGTTGATC TGCAAAGCCA ACGCCTTAAA CCCAAAGGTT GGAGCAAACT CGCCAAGCCC
AGCCTAACCC AGCCCACCGA TATTGTGCTC TACGAACTGC ATGTGCGTGA TTTTTCGATC
ACCGATTCGA GTGTGTCAGC TGAGTTACGT GGCACCTATA AAGCCTTTAG CCAAGTTGAA
TCGAATGGCA TGCAACATTT GCAGCGACTG GCTAAGGCCG GGGTGAGCCA TGTGCACTTG
CTGCCAGTCT TTGATATTGC CACCATTGAA GAACATCGGC CTGATCGCAC GCGGATTGAT
TTTGACTATT TAGCCAGTTT GCCTGCTGAT TCGACTGAGC AGCAAGCCTA TCTTTTTCCA
ATTCGCGATC GTGATGGCTT CAATTGGGGC TATGACCCTC GCCATTACAC CACGCCCGAA
GGCTCGTATA GCACCGATCC TGATGGTTCA ACGCGAATCT ACGAGTTTCG CGAGATGGTT
CAAGCGCTGA ATCAGATTGG GCTGCGGGTG GTGATGGATG TGGTTTACAA TCATACCCAT
TCGAGTGGTC AAGCCAGTTG CGCCGTGCTC GACCGAATTG TGCCAGGCTA CTATCATCGC
TTGGATGCTG ATGGCAATGT TTGCAACAGC ACCTGCTGCG CCAACACCGC TAGCGAACAG
CATATGATGG AAAAATTAAT GCTCGATTCG CTGCGCACAT GGGCCGTCGA TTATAAAGTT
GATGGCTTTC GCTTCGATTT GATGGGCCAT CATCTGAAGC GTAATATGTT GGCGATTCGC
GCCATGCTCG ATAGTTTGAC GTTGGCTGAG CATGGCGTTG ATGGTAAAGC GATCTATGTG
TATGGCGAGG GCTGGAATTT TGGCGAAGTT GCCGACGGTG CACGCGGCGA AAATGCCTCG
CAATATGCCA TGGCTGGTAC GGGCATTGGC ACCTTCAGCG ATCGTCTGCG CGATGCGGCG
CGGGGTGGCG GCCCCTTTGT TGGTTTTCAA GTGCAGGGCT TTGCCACAGG CTTGCTTGAT
CGGCCTAATG TGTACGAACA GCGGGCGTTT GTTGAGCGCC ATTATCAAGT TGCGGTGCTC
AGCGATGTGG TGCGGCTGAG TTTGGCGGGC AATTTGGCTG AGTATCCAAT CCTCAGTTGC
GAAGGCCAAC AAACTTTGGG CGGCCACTTG TATATCAATG GCAAACCAGC AGCCTATGGT
TTACGTCCTG ATGATCATAT TGCCTATGTT TCAGCCCACG ATAATGAAAC CTTATTTGAT
GGAGTGCAAG TCAAAGCCCC GCTCGAATCG CCAATCGCCG AGCGGGTGCG TATGCACAAT
TTGGCCTTGA GTTTAGTGGC CTTAGCCCAA GGAATTCCAT TTTTTCATGC TGGCGATGAG
TTGCTGCGCT CGAAATCGCT GGATCGCAAC AGCTACAACT CCAGCGATTG GTTTAATCGC
ATCGATTGGA CGGGCCAGCA GAATACTTGG GGTTCGGGCT TGCCGCCCTC GGCGGATAAC
CATGAACATT GGGCCACGGT CGGGCCGTTG TTAGCCAACC CTGCACTCAA GCCAACCCCT
GAGGATATGG CATTTAGCTA TGCGCATTTT CAAACGATGC TACAAATTCG GCGTAGCTCA
GGCTTGTTTC GGTTGAACAG TGCTGAATTG ATCAAGCAAA AAGTCTGGTT TCCCAATACT
GGGCCTGATC AAGTGGTTGG TTTGGTGCTG ATGGTGCTTG ATGATGGTGT AGGCGAGCAG
TGCGATCAGC AATTTAGCCG CATTGTGGTG GCTTTCAATG GCTCGCACCA TGATTTAAGT
TATAGCGATG CCAGTTTTGG TCATTACAAT TTGCAACTGC ACCCCTTACT GGCAAATGGC
TATGATCCAG TGCTGGCGCA GGCGAGCTTT GATCGCAACC TTGGCAGCAT CAGCGTGCCG
GGGTTTAGCT GTGTGGTGTG GGTCGAATAT CGCTAA
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| Protein sequence | MLDQSVVEEQ PSVGQLDRLR AYWVRRDTIV WNIHALPNAR YELHYSLDGS LELTPQGIQH
GTVLPLERDP LGLDSTLAAA FPHLQGLPVL RLAPEHHDLV ATILRGQVAV QAYHADDQSL
IDATALQIPG VLDDLYHYTG ELGVSFDEQK RPILRLWAPT ARSVSLLLYA DSAKGTRAIR
SGMMFDPQTG VWSIVGKPSW KNQFYRFLVD VFVPSTGQFE QNSVTDPYSL SLSTNSQHSQ
IVDLQSQRLK PKGWSKLAKP SLTQPTDIVL YELHVRDFSI TDSSVSAELR GTYKAFSQVE
SNGMQHLQRL AKAGVSHVHL LPVFDIATIE EHRPDRTRID FDYLASLPAD STEQQAYLFP
IRDRDGFNWG YDPRHYTTPE GSYSTDPDGS TRIYEFREMV QALNQIGLRV VMDVVYNHTH
SSGQASCAVL DRIVPGYYHR LDADGNVCNS TCCANTASEQ HMMEKLMLDS LRTWAVDYKV
DGFRFDLMGH HLKRNMLAIR AMLDSLTLAE HGVDGKAIYV YGEGWNFGEV ADGARGENAS
QYAMAGTGIG TFSDRLRDAA RGGGPFVGFQ VQGFATGLLD RPNVYEQRAF VERHYQVAVL
SDVVRLSLAG NLAEYPILSC EGQQTLGGHL YINGKPAAYG LRPDDHIAYV SAHDNETLFD
GVQVKAPLES PIAERVRMHN LALSLVALAQ GIPFFHAGDE LLRSKSLDRN SYNSSDWFNR
IDWTGQQNTW GSGLPPSADN HEHWATVGPL LANPALKPTP EDMAFSYAHF QTMLQIRRSS
GLFRLNSAEL IKQKVWFPNT GPDQVVGLVL MVLDDGVGEQ CDQQFSRIVV AFNGSHHDLS
YSDASFGHYN LQLHPLLANG YDPVLAQASF DRNLGSISVP GFSCVVWVEY R
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