Gene Haur_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0088 
Symbol 
ID5731981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp113386 
End bp114111 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content54% 
IMG OID641277210 
Productprimosome, DnaD subunit 
Protein accessionYP_001542868 
Protein GI159896621 
COG category 
COG ID 
TIGRFAM ID[TIGR01446] DnaD and phage-associated domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGCGT TTCATGGCTT CTCAACTGAG AATCTCGTGC CGCTACCGGC AGAATTCTTT 
AGCGATGTTC TCCCTTCAAT CAGCAACTTG GCTGAACTCA AAGTAACCCT GCATGTCTTT 
TGGTTGGTTA GCCAGCAACG TGGCCGCGCC AAACGCGTTT CGTGGGATGC ACTGAGCAGC 
GATAGTGCCC TGGCGCAATC GTTGCGGGCC GTCTCGCAGT TGCGCCCAAC TAGCGATGTT 
TTAGAAGAAG CCTTGGGTTT GGCGGTTGAG CGGGGCACAT TACTGCACTT AATCAGCCCC 
GAACCTGGCC GCGTGGTTAG TTGGTATTTG GTCAATACCC AAGCCAATCG GCATTGGGTC 
GAGCGCCAAG CAGGCCAGCG TGTGCTTGCA CCCGAGGCTA GCCCGACGGC GCAGCCAACC 
ATTTTTGGGC TTTACGAACA AAATATTGGC CTGCTCACGC CACTGCTGAT TGAGCAATTG 
CACGAGGCTA GTGCCAAATA TCCCGCTGTA TGGCTCGAAG AAGCCATTGC CAAAGCGGTT 
GAAGCCAATG TGCGCAATTG GCGCTACATT CGGCGCATTC TAGAACGGTG GGAAACCGAT 
GGAAAAGAAT CTACGTCGCA TCGATCCGAG CAGCTTTTCG ATCTCAGCAA ATATACCACG 
GGCAAATATG CCGCCCTCTT CGGAAGAAGC GGCGATTCCG ATGGAGGAGA CTTGTCCGAT 
TTGTAA
 
Protein sequence
MAAFHGFSTE NLVPLPAEFF SDVLPSISNL AELKVTLHVF WLVSQQRGRA KRVSWDALSS 
DSALAQSLRA VSQLRPTSDV LEEALGLAVE RGTLLHLISP EPGRVVSWYL VNTQANRHWV 
ERQAGQRVLA PEASPTAQPT IFGLYEQNIG LLTPLLIEQL HEASAKYPAV WLEEAIAKAV 
EANVRNWRYI RRILERWETD GKESTSHRSE QLFDLSKYTT GKYAALFGRS GDSDGGDLSD 
L