Gene Haur_0063 details

Gene Information

• Locus tag: Haur_0063
• ID: 5731935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 80277
• End bp: 82202
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641277184
• Product: excinuclease ABC, C subunit
• Protein accession: YP_001542843
• Protein GI: 159896596
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGATT TATCTCATAC GAATATTGCC AATCATGCGT TGTTTGAAGA ACGCTTGCGC 
AACTTGCCAC TCTCGCCAGG CGTGTATATC TACCGCGATC AGGCCAATAC GATCATCTAC 
GTGGGCAAAT CCAAAAGCCT GCGGGATCGG GTGCGTTCGT ATTTTGGTGC GCCGCGTGGC 
CTAACCAGCA AAACCCGACG GTTGGTGCAA AATATCGCCG ATTTTGAGTT TATTACTACC 
GATACCGAGC TAGAAGCGCT ACTTTTAGAA ATGAATCTGA TCAAAAAGCA TCGCCCACGC 
TACAATGTGT TGCTCAAGGA TGACAAAAGT TATCCCTATA TCAAAATTAC CAAAGAAGCA 
TGGCCAAGGG TTTTACGAGT GCGCAAAGTG ATTGAAGATG GTGGCATTTA TTTCGGGCCA 
TTTGCCAAAG CTAGCAGCGT TTATGCCACA ATTGAGTTAT TAAATAAATT ATTTGCTTTT 
CGTTTATGCA ACGATGATAT GTTTAAAAAG CACGAGCGCC GCAATCGGGC TTGTATGTAT 
TATGATATTA AACGCTGTCT TGGGCCATGT GCCAACAACT GTACCACCGA AGAATATAGC 
ACTGCAATTA ATCAAGTACG CTTATTTTTA GGTGGCAAGC CTGAAGCAAT TTTACGTGAC 
CTAAAAGTGA AAATGAACCA AGCTGCCGAA GATTTACAAT TTGAACGCGC GGCCTATGTT 
CGCGATCAAA TCAAGGCAGT CGAACGGGTG ATGGAGCGCC AAAAAGTGCT GAATACCGCC 
GCCAGTGACC AAGATGTAAT TGCTTTTGCC CGTGATGAAG GTAAAGCGGT GGTGCAGGTG 
TTCTACATTC GTGGTGGCAA GTTGATTGGC TCGGAGCCAT TTACGCTGCA AGGCACGGAG 
GAAGAACATC CCGAAGCCTT GATGAGTTCG TTCTTGACCC AATTTTATGA TGCCGCCGCC 
GATATTCCGC CCAATATTCT GCTGCCCGAT TATCCCGAAG AAACCCAAAT TATTGAGCAA 
TGGCTGGAAA GCAAGGGCGG ACATAAAGTG AGTTTGCAAG TGCCACGACG CGGCGATAAA 
AAAGATTTGG TCGATTTGGC GGCCCGCAAT GCCAGCCAAA CCCTCGATCA ATTGCGCTTG 
CAATGGCTCA ACGCCGAACA ACGGGCAACA GCCGGGCTGA GTCAATTGCG CGAATTATTG 
AATTTAGCCG AATTGCCCCA ACGCATCGAA TGCTACGACA TCTCGAATAC CCAAGGCACC 
AATTCGGTGG GCAGTATGGT GGTGTTTGAG CAGGGCGAGC CAGCCAAAAA GCACTATCGC 
CGTTTCAAAA TCAAAACCGT TGAAGGTGCT AATGATGTGG CCTCGCTCAG CGAAGTGCTA 
CAACGCCGGT TTGCCCGCGC CGATGATACT GGCCAAACGG ACGAGCCAGA ATCAACCGAG 
CAAACCAGCG CCGAGCCAAC TAATAACGAC GAAACTTGGG CGGTATTGCC CGATCTGATT 
TTGATCGACG GTGGGATCGG CCAAGTCAAT GCTGCAGCCA AAACTTTGGC AGCGGCTGGT 
TTTGAGCATA TTCCGGTGGT TGGCTTGGTC AAGGGCGATA CCAAAGGCCA CTTGCCCTAT 
GGTTTGGTCA AACCTGGCCA GCGTGTGCCA ATCGCCTTTG CCCAAAACGA TCCAGGCTTG 
CATCTCGTTC AGCGCATCGA CGAAGAAGCC CATCGCTTTG CGATTAGCTA TCACCGTAAA 
TTGCGCACTA AAGGCATGCT GCGCTCGACC ATGGAAGATA TTCCAGGTAT TGGCCCCAAA 
CGCAAAAAAG CGTTGATCAA CGCCTTTGGC TCGCTGGAGG GCATTCGCAA CGCCAGCATC 
GAGGAGCTAG CCGCCGTGCC TGGCATGACC CGCAAAGCCG CCGAGGAGAT CAAAGGGCTG 
TTGTAG 

 

Protein sequence

MPDLSHTNIA NHALFEERLR NLPLSPGVYI YRDQANTIIY VGKSKSLRDR VRSYFGAPRG 
LTSKTRRLVQ NIADFEFITT DTELEALLLE MNLIKKHRPR YNVLLKDDKS YPYIKITKEA 
WPRVLRVRKV IEDGGIYFGP FAKASSVYAT IELLNKLFAF RLCNDDMFKK HERRNRACMY 
YDIKRCLGPC ANNCTTEEYS TAINQVRLFL GGKPEAILRD LKVKMNQAAE DLQFERAAYV 
RDQIKAVERV MERQKVLNTA ASDQDVIAFA RDEGKAVVQV FYIRGGKLIG SEPFTLQGTE 
EEHPEALMSS FLTQFYDAAA DIPPNILLPD YPEETQIIEQ WLESKGGHKV SLQVPRRGDK 
KDLVDLAARN ASQTLDQLRL QWLNAEQRAT AGLSQLRELL NLAELPQRIE CYDISNTQGT 
NSVGSMVVFE QGEPAKKHYR RFKIKTVEGA NDVASLSEVL QRRFARADDT GQTDEPESTE 
QTSAEPTNND ETWAVLPDLI LIDGGIGQVN AAAKTLAAAG FEHIPVVGLV KGDTKGHLPY 
GLVKPGQRVP IAFAQNDPGL HLVQRIDEEA HRFAISYHRK LRTKGMLRST MEDIPGIGPK 
RKKALINAFG SLEGIRNASI EELAAVPGMT RKAAEEIKGL L