| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0976 |
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| Symbol | rpsA |
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| ID | 4240469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1074384 |
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| End bp | 1076027 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638104532 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_719187 |
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| Protein GI | 113461119 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00186692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAT CTTTTGCTCA ACTATTTGAA GAATCATTAA AAGACCTTGA AACTCGTGTA
GGTTCAATCG TTAACGCTAC TGTTGTTGCT ATCGAAAAAG GCTTCGTGTA CGTAGATGCA
GGTTTGAAAT CAGAAGCTCG TATTCCGGCG GAAGAATTCC AAAATGCTCA AGGTGAATTG
GACGTTAAAG TGGGTGACGT TGTAAACGTT GCTTTGGACG CTGTTGAAGA CGGTTTCGGT
GAAACTAAAC TTTCACGTGA AAAAGCGGTA CGTCAAGAAT CTTGGATTGA TTTAGAAAAA
GCATATGAAG AACAAGCAAC TGTTATCGGT TTAATCAACG GTAAAGTGAA AGGCGGTTTC
ACAGTTGAGT TAAACGGTGT TCGTGCGTTC TTACCGGGTT CATTGGTAGA TACTCGCCCA
ACTCGTGAAG CGGATCACCT ATTAGGTAAA GAACAAGAAT TTAAAGTCAT TAAATTAGAT
CAAAAACGCA ACAATGTTGT GGTATCTCGT CGTGCAGTCA TCGAATCAGA AAATAGTCAA
GAACGTGAAG AAATTTTAGC TAACTTAGCT GAAGGTTCAG AAGTTAAAGG TACTGTTAAA
AACTTAACCG ATTACGGTGC ATTTGTTGAT TTAGGTGGTG TTGACGGTTT ATTGCATATC
ACCGATATGG CGTGGAAACG TGTTAAACAT CCGGGTGAGA TTGTAAGTGT CGGCGATGAA
ATTACAGTTA AAGTCCTCAA ATTTGACAAA GATAAAACAC GTGTGTCTTT AGGCTTAAAA
CAATTGGGTC AAGATCCTTG GGTAGCTATT GCAGAAAATC ATCCGGTGAA CAGCAAATTA
ACAGGTAAAG TAACTAACTT AACTGACTAT GGTTGCTTTG TTGAAATTTT AGAAGGTGTT
GAAGGTTTGG TTCATGTGTC AGAAATGGAT TGGACAAATA AAAATATTCA CCCATCTAAA
GTTGTTCATT TAGGTGATGT TGTTGAAGTA ATGGTATTGG AAATCGATGA AGAACGTCGT
CGTATTTCTT TAGGTTTAAA ACAATGCAAA CCTAACCCAT GGTTACAGTT TGCTGAAACT
CACAACAAAG GTGATAAAGT TTCCGGTAAG ATTAAGTCTA TTACAGATTT CGGTATTTTC
ATCGGTCTTG AAGGCGGAAT TGATGGTTTA GTACATTTAT CTGATATTTC TTGGAATATT
CCGGGTGAAG AAGCTGTTCG TAACTATAAA AAAGGTGACG AAGTAGAAGC AGTTGTATTA
CAAGTTGATT CTGCAAAAGA GCGTATTTCT TTAGGTATCA AACAGCTGGA AGAAGATCCG
TTTAATAATT TCATTGCGGT AAACAAAAAA GGTGCTGTGG TCAGTGCTAA AGTGGTTGAA
GTTGACGCAA AAGGTGCTAA AGTTGAATTA GGAATCGGCG TTGAAGGTTA TATTCGTACA
GCTGATTTGA GCAATGAAGT TGTTGTTGGT GATGTTGTTG AAGCGAAATA TACCGGTGTT
GACCGTAAAT CTCGTATCGT TCATCTATCT GTTAAAGCAA AAGACCAAGC AGAAGAAGCG
GCGGCAGTTG CAAATGTGAA TAAAGAAGAA ATTGTTATTC CAAATGCAAT GGCTGAAGCA
TTTAAAGCGG CAAAAGGTGA ATAA
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| Protein sequence | MSESFAQLFE ESLKDLETRV GSIVNATVVA IEKGFVYVDA GLKSEARIPA EEFQNAQGEL
DVKVGDVVNV ALDAVEDGFG ETKLSREKAV RQESWIDLEK AYEEQATVIG LINGKVKGGF
TVELNGVRAF LPGSLVDTRP TREADHLLGK EQEFKVIKLD QKRNNVVVSR RAVIESENSQ
EREEILANLA EGSEVKGTVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PGEIVSVGDE
ITVKVLKFDK DKTRVSLGLK QLGQDPWVAI AENHPVNSKL TGKVTNLTDY GCFVEILEGV
EGLVHVSEMD WTNKNIHPSK VVHLGDVVEV MVLEIDEERR RISLGLKQCK PNPWLQFAET
HNKGDKVSGK IKSITDFGIF IGLEGGIDGL VHLSDISWNI PGEEAVRNYK KGDEVEAVVL
QVDSAKERIS LGIKQLEEDP FNNFIAVNKK GAVVSAKVVE VDAKGAKVEL GIGVEGYIRT
ADLSNEVVVG DVVEAKYTGV DRKSRIVHLS VKAKDQAEEA AAVANVNKEE IVIPNAMAEA
FKAAKGE
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