Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0262 |
Symbol | tolB |
ID | 4239460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 259201 |
End bp | 260505 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638103799 |
Product | translocation protein TolB |
Protein accession | YP_718470 |
Protein GI | 113460408 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000248265 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTT CTGCATATTT AACTACATTA TTCATAGTGC TTTTTAGTTT GTTCATACAA ACCGTACAAG CTGAAAGTGA GGTAAGAATT GTCATTGATG AAGGGGTTGA TAGTGCTCGG CCTATTGCGA TAATTCCATT TAAATGGAAT GGTAGTGACT CTATGCCGAT AGATGTAGCT GATATCATTT CTGCAGATTT ACGCAACAGT GGTAAATTTA ATCCTATTGC AGTCAGTAAA ATGCCTCAAA AACCGACATC AGCAAGCGAG GTGATTTCCG ATGTTTGGTC TTCTTTAGGC ATTGATGCAG TAGTTGTTGG ACAAGTTACA CCCAATGAAA AAGGATATAG TATCGCATAT CAATTAGTAG ACACTATCGG TGCTTCAGGA AACGCGGGAG AGGTACTAAG TCAAAACCAG TACGCTGTAC CGAAAAATGC TATTCGTTTA GGTGCTCATA CTATTAGTGA TGAAGTTTTT GAAAAGCTGA CTGCAATTCG TGGTGCATTT AGAACTAAAA TTGCATACGT TGTACAAAAG CACGGTGGCT CAAAACCTTA TCAAGTTCGT GTTGCAGATT ATGATGGACA TAATCAATTT ATTGTTTATA GTAGTTCGCA ACCATTGATG TCTCCCGCCT GGTCGCCTGA TGGTAGTAAA TTGGCTTATG TATCTTTTGA AAATCGTAAA TCTCAATTAA TTGTACATGA TTTACAGTCT GGAGCTCGTC GGGTTATTGC TGCATTCCCT GGGCATAATG GAGCTCCGGC ATTTTCTCCT GATGGTTCAA AAATAGCATT TGCTTCATCA AAAGATGGTG TATTAAATAT TTATGTCATG AATTTAGGAA ACGGGACTAT TTCTCAGTTA ACTAGCGGTG CAGGCAACAA CACGGAACCT TCTTGGTCAC CGGATGGGCA ATCTATAATT TTTACTTCGG ACAGAGCCGG CGGACCTCAA ATTTATCAGA TGGATGTATT TGGTAATGGT ATATCATTAG TTTCTGCTGG TCGGGGGTAT AGTGGAAAAA TCTCTGCAGA TGGTAGTATA TTAGTGATGA TTTATGGCGA TAATATTGTT AAAAAAGATT TGGCGACAGG TGTGACGGAA ATGTTAAGCT CTACTTTCTT AGATGAAAGC CCAAGTATTT CACCCAATGG AATTATGATT ATTTATAGTT CTACACAAGG TCTAGGAAAG GTGCTACAAT TGGTTTCCGC TGACGGTCGT TTTAAAGCAC GTCTACCAAG TAGTGACGGT CAGATTAAAT TTCCAGCTTG GTCACCATAT TTAAATAAAA ACTAG
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Protein sequence | MKFSAYLTTL FIVLFSLFIQ TVQAESEVRI VIDEGVDSAR PIAIIPFKWN GSDSMPIDVA DIISADLRNS GKFNPIAVSK MPQKPTSASE VISDVWSSLG IDAVVVGQVT PNEKGYSIAY QLVDTIGASG NAGEVLSQNQ YAVPKNAIRL GAHTISDEVF EKLTAIRGAF RTKIAYVVQK HGGSKPYQVR VADYDGHNQF IVYSSSQPLM SPAWSPDGSK LAYVSFENRK SQLIVHDLQS GARRVIAAFP GHNGAPAFSP DGSKIAFASS KDGVLNIYVM NLGNGTISQL TSGAGNNTEP SWSPDGQSII FTSDRAGGPQ IYQMDVFGNG ISLVSAGRGY SGKISADGSI LVMIYGDNIV KKDLATGVTE MLSSTFLDES PSISPNGIMI IYSSTQGLGK VLQLVSADGR FKARLPSSDG QIKFPAWSPY LNKN
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