Gene HS_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0262 
SymboltolB 
ID4239460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp259201 
End bp260505 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content39% 
IMG OID638103799 
Producttranslocation protein TolB 
Protein accessionYP_718470 
Protein GI113460408 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000248265 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT CTGCATATTT AACTACATTA TTCATAGTGC TTTTTAGTTT GTTCATACAA 
ACCGTACAAG CTGAAAGTGA GGTAAGAATT GTCATTGATG AAGGGGTTGA TAGTGCTCGG
CCTATTGCGA TAATTCCATT TAAATGGAAT GGTAGTGACT CTATGCCGAT AGATGTAGCT
GATATCATTT CTGCAGATTT ACGCAACAGT GGTAAATTTA ATCCTATTGC AGTCAGTAAA
ATGCCTCAAA AACCGACATC AGCAAGCGAG GTGATTTCCG ATGTTTGGTC TTCTTTAGGC
ATTGATGCAG TAGTTGTTGG ACAAGTTACA CCCAATGAAA AAGGATATAG TATCGCATAT
CAATTAGTAG ACACTATCGG TGCTTCAGGA AACGCGGGAG AGGTACTAAG TCAAAACCAG
TACGCTGTAC CGAAAAATGC TATTCGTTTA GGTGCTCATA CTATTAGTGA TGAAGTTTTT
GAAAAGCTGA CTGCAATTCG TGGTGCATTT AGAACTAAAA TTGCATACGT TGTACAAAAG
CACGGTGGCT CAAAACCTTA TCAAGTTCGT GTTGCAGATT ATGATGGACA TAATCAATTT
ATTGTTTATA GTAGTTCGCA ACCATTGATG TCTCCCGCCT GGTCGCCTGA TGGTAGTAAA
TTGGCTTATG TATCTTTTGA AAATCGTAAA TCTCAATTAA TTGTACATGA TTTACAGTCT
GGAGCTCGTC GGGTTATTGC TGCATTCCCT GGGCATAATG GAGCTCCGGC ATTTTCTCCT
GATGGTTCAA AAATAGCATT TGCTTCATCA AAAGATGGTG TATTAAATAT TTATGTCATG
AATTTAGGAA ACGGGACTAT TTCTCAGTTA ACTAGCGGTG CAGGCAACAA CACGGAACCT
TCTTGGTCAC CGGATGGGCA ATCTATAATT TTTACTTCGG ACAGAGCCGG CGGACCTCAA
ATTTATCAGA TGGATGTATT TGGTAATGGT ATATCATTAG TTTCTGCTGG TCGGGGGTAT
AGTGGAAAAA TCTCTGCAGA TGGTAGTATA TTAGTGATGA TTTATGGCGA TAATATTGTT
AAAAAAGATT TGGCGACAGG TGTGACGGAA ATGTTAAGCT CTACTTTCTT AGATGAAAGC
CCAAGTATTT CACCCAATGG AATTATGATT ATTTATAGTT CTACACAAGG TCTAGGAAAG
GTGCTACAAT TGGTTTCCGC TGACGGTCGT TTTAAAGCAC GTCTACCAAG TAGTGACGGT
CAGATTAAAT TTCCAGCTTG GTCACCATAT TTAAATAAAA ACTAG
 
Protein sequence
MKFSAYLTTL FIVLFSLFIQ TVQAESEVRI VIDEGVDSAR PIAIIPFKWN GSDSMPIDVA 
DIISADLRNS GKFNPIAVSK MPQKPTSASE VISDVWSSLG IDAVVVGQVT PNEKGYSIAY
QLVDTIGASG NAGEVLSQNQ YAVPKNAIRL GAHTISDEVF EKLTAIRGAF RTKIAYVVQK
HGGSKPYQVR VADYDGHNQF IVYSSSQPLM SPAWSPDGSK LAYVSFENRK SQLIVHDLQS
GARRVIAAFP GHNGAPAFSP DGSKIAFASS KDGVLNIYVM NLGNGTISQL TSGAGNNTEP
SWSPDGQSII FTSDRAGGPQ IYQMDVFGNG ISLVSAGRGY SGKISADGSI LVMIYGDNIV
KKDLATGVTE MLSSTFLDES PSISPNGIMI IYSSTQGLGK VLQLVSADGR FKARLPSSDG
QIKFPAWSPY LNKN