| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4388 |
|---|
| Symbol | |
|---|
| ID | 5166468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 5083595 |
|---|
| End bp | 5084662 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640551870 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001233104 |
|---|
| Protein GI | 148266398 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2856] Predicted Zn peptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAC GGGAGCTTAG AGAGCTTGCC GGTATGAAGC AAGAGGCCTT GGGCGAACTT
GCCGGTGTTA CCCGACAAAC CATAGCCGCC TGGGAACGTG GGGAACGACA GCCTTCAATG
CAGCAGGTGG TAAAACTCTG TCAGATTTTG CATGTACCCA TCGACGTAAT GCTCGGCACG
GGCAATGTGA CTGAACCGGT GTTGCTGTTC CGCGCTGATG CCACCGAAAC CCTGTCACCA
GCCCTGAAAA GCTTGCTGAC CCGCAAGGCT TACGATTACG CCGAGATCGA GAAGTTGGCA
GGAGTTCTGC CAAATCTCCC CGTATCCCGG CCCCTTGATG CGTTCGATCA ACATATTGTC
GAACAGGTTG CTAATGAGGT GAGGGATTGG CTGGGTGTTG AGGACGCTCC ATTGGGAGAT
GTCCTTTCTC TCCTGGAAAC CAAGGGGCTC AAGATTTTTC TGCACCAGCT CCCCGACACG
GTCTCCGGGT TTTCCGCCTA CACGGAAGAA GTCGGCGGGG TTATTTTCGT CAACTCGAAT
CACCGTACGG AGAGACAATA CTTTACCGCG CTTCACGAAC TCTCCCATCT TATTTTTCAT
CGGCGGGAGT ACCAAACTCC CACTTCAATG CATCCGAAAA CCGGTAGGAC GGACCCCCGT
GAGCAGGCCG CCAATCATCT GGCCGGGGCG GTCATTCTGC CGCGCAATAT CGTCGAGGCC
GAGCTGCACC CCTACCGTAA CCGTTGGCTT CCGTACTCCC TGCTTGCAGA CATCAAGATT
CGCTACTCCG TGAGCATGAG GACGATTCTG GTCCGTGCTG CCCAACTGGA CATAATTTCT
TCCAGGCAGT CATTCCAGCA AATCGCCAAG CTCAATGACA AGTATGGCAA GGTAAACGAG
GCAGTGGACC TTAAACCACC GGGATCGCTT CGCCGTCTCG ACAGGCTGGT GTATCAAGCC
CTGATCCAGG AAAAAATCAC CACTTCAAAA GCCGCCGAGG TGCTTGGAGA GCCGGTCCGC
ACAGTCAGAA ACGAACTTAC CAAGTGGCTT TCGGAAGACC CTTCTTGA
|
|---|
| Protein sequence | MILRELRELA GMKQEALGEL AGVTRQTIAA WERGERQPSM QQVVKLCQIL HVPIDVMLGT
GNVTEPVLLF RADATETLSP ALKSLLTRKA YDYAEIEKLA GVLPNLPVSR PLDAFDQHIV
EQVANEVRDW LGVEDAPLGD VLSLLETKGL KIFLHQLPDT VSGFSAYTEE VGGVIFVNSN
HRTERQYFTA LHELSHLIFH RREYQTPTSM HPKTGRTDPR EQAANHLAGA VILPRNIVEA
ELHPYRNRWL PYSLLADIKI RYSVSMRTIL VRAAQLDIIS SRQSFQQIAK LNDKYGKVNE
AVDLKPPGSL RRLDRLVYQA LIQEKITTSK AAEVLGEPVR TVRNELTKWL SEDPS
|
|---|
| |