| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0234 |
|---|
| Symbol | |
|---|
| ID | 5164772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 299631 |
|---|
| End bp | 300503 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640547733 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001229023 |
|---|
| Protein GI | 148262317 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAG GAAGCATTGT CGCGATCGTC ACACCGTTCA AAAACGGAGC GGTGGACGAA
GAGAAGCTGA GGGAGCTGGT AGAGTTCCAG ATCGAGAACG GCACCGACGC CATTGTGCCG
TGCGGTACCA CCGGTGAGTC CTCGACCCTG GATTACGAGG AACACGACCG GGTGATCGAG
ATCGTCGTCG AGCAGGTGAA GAAGCGGGTT CCGGTCATTG CCGGCACCGG CTCCAACTCC
ACCAAGGAGG CGATCGAGAT GACCAGTCAC GCCAAGACCC TTGGCGCGGA CGGCGCCCTG
CTCGTCACCC CCTACTACAA CAAGCCGACC CAGGAAGGGC TTTTCCTCCA CTACAAGGCG
GTAGCCGACG CGGTGGCGCT TCCCCAGATC CTCTACAACG TGCCCGGACG CACCGGCGTC
AACCTCCTAC CCGAAACAGT GGCGCGGCTC GCCGAGCACA AAAACATCGT CGCCATCAAA
GAGGCGACCG GCTCGCTGCA GCAGGCCTCC GAGATCATTG ACCTGTGCGG CGACAAGATC
GACGTCTTTT CCGGCGACGA TTTCATCACC TTTCCGATGA TGGCCTGCGG CGCCAAGGGG
GTCATCTCCG TCACCGCCAA CATCATGCCC AAGGAAGTGG CGGCACTGGT TGACGCCTTC
TTCGCAGGTA AGATGGAAGA GGCGCGCCAA TGGCACCTGA AGCTGCTGAA GATCTCCAAC
GCCATGTTCA TCGAGAGCAA CCCGGTGCCG GTCAAGACCG CCGTGGCCCT AATGGGCAAA
TGCAGCGCCG AAGTCCGTCT GCCGCTGGCA CCGCTGGCCG AGGCAAACAA GGTCAAACTT
GTTGCGATCA TGAAAGAGTA CGGACTGATC TAA
|
|---|
| Protein sequence | MFKGSIVAIV TPFKNGAVDE EKLRELVEFQ IENGTDAIVP CGTTGESSTL DYEEHDRVIE
IVVEQVKKRV PVIAGTGSNS TKEAIEMTSH AKTLGADGAL LVTPYYNKPT QEGLFLHYKA
VADAVALPQI LYNVPGRTGV NLLPETVARL AEHKNIVAIK EATGSLQQAS EIIDLCGDKI
DVFSGDDFIT FPMMACGAKG VISVTANIMP KEVAALVDAF FAGKMEEARQ WHLKLLKISN
AMFIESNPVP VKTAVALMGK CSAEVRLPLA PLAEANKVKL VAIMKEYGLI
|
|---|
| |