Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0004 |
Symbol | |
ID | 5164518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 3913 |
End bp | 6297 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640547503 |
Product | DNA gyrase, B subunit |
Protein accession | YP_001228795 |
Protein GI | 148262089 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGACG ATACAACTTC AAAAGATTAC GGTGCGGACA AGATAAAGGT ACTGGAGGGG CTTTCTGCCG TACGGAAACG TCCTGCCATG TATATTGGCT CCACATCGGT ACAGGGACTC CATCACCTGG TTTACGAAAT TGTCGACAAT TCCATAGACG AAGCATTGGC CGGACATTGT GACGACATCT TGGTCACCAT TAATGTTGAC GGCTCAGTAA CGGTGGTGGA CAACGGCCGC GGCATTCCGA CGGATATGCA TCCGACAGAA GGAAAATCAG CGGCGGAAGT GGTTTTGACG GTGCTCCATG CCGGCGGCAA GTTCGACAAC AGTTCTTACA AGGTTTCCGG CGGATTGCAC GGCGTCGGCG TGTCGGTGGT TAACGCACTT TCGAAAAAGC TGGAGTTGGA GATCCGCCGG GATGGAAAGC TGTTCCGACA ATCCTATCGT TGCGGAGATC CGCAAGGACC CCTGGAAGTA GTGGGTGAAA CAAAGAAGCG GGGGACAAAA ATAACCTTTT TCCCGGATGA TGAGATATTC GAGACCACGG AATTCTCGTT CGACACACTT TCCCAACGTC TGCGGGAAAT GGCATTCCTC AACGCAGGGG TCAGGATAAA GATTGTCGAC GAGAGAACGG AAAAGGTCCA TGAATTCTTC TACGAAGGCG GAATCAACTC CTTTGTGGAA TACCTGAACA AGAACAAGAC ACCGATCCAT CCCAAGCCGA TCTACATCAG CGGCGAAAAA GGCGGGGTGG AGATGGAAAT TGCCATGCAG TACAACGATT CCTATGATGA GAAGATATTC ACCTTCGCCA ACAACATCAA CACCCATGAA GGTGGAACCC ATCTCATCGG ATTCAAGGCT GCCCTGACCC GTACCATGAA CACCTATGCC AACGCCAACA ACCTGCTCAA AAACGTCAAG GAGAACATTT CCGGCGAAGA CCTGCGCGAA GGTTTGACAT CTGTGATATC GGTCAAAATC CCCCAGCCCC AGTTCGAAGG TCAGACCAAG ACCAAACTCG GCAACTCTGA GGTCAAGGGT TATGTGGAAA CCCTGATGAA TGAGAAGCTC GCCACCTATC TGGAAGAGAA CCCGCAGATT GCCAAGCGCA TTCTTGAAAA ATCCATCGAT GCTGCCCGCG CCAGGGAAGC TGCCCGCAGG GCCCGTGATC TGACCCGTCG CAAAGGGGCG CTGGAAGTGG GAACCCTCCC CGGCAAACTG GCTGACTGCC AGGAAAAAGA CCCTGCGCTT TGCGAATTGT TCCTCGTGGA AGGTGACTCT GCCGGCGGCT CGGCAAAACA GGGAAGGGAC CGGAAGTACC AGGCGATTCT CCCGCTCAAG GGGAAGATCC TCAACGTGGA AAAGGCCCGT TTCGACAAAA TGCTTTCATC CCAGGAGATC AGGACCCTCA TAGCGGCACT CGGTACCAGT ATCGGCAAGG GAGATTTCGA TATCGCCAAG CTCCGTTACC ATCGCATCAT CATCATGACC GATGCCGATG TGGACGGTTC CCACATCCTG ACGTTGCTGT TGACGTTTTT CTTCAGGCAG ATGCTGGAAA TGATCGAGCG CGGCTACCTC TACATCGCCC AGCCGCCGCT TTATAAGATC AAGCGGGGGA GAAAAGAACA GTACCTGAAA AACGAGGCGG CCCTGCAGAA TTACCTGCTT GAGGAAGGGA CGGAAGACAT GACGCTCCGT CTCGGCAGCG ATGAACGGAC CTATCGGGGC AAACAGATCA TTCCGCTGCT CAAGCAACTT ATCGAGCACA ATTCCCTGTT CGGCAAGGTA GTAAAGAAGG GTCTCAACGA GGAACTGCTG AAGATGTTCC TGAAAAGCGG AGTAAAGAGC GGCTTCGAGG AGTTGCGCGA CCTGGAGCCA TACTTGGCGA AGATGAAGGA AAGCTTTGCC GGCTCCGACT ACGTGGTTAG TGAGCAGAAG ATAATCTTCA TGATCGGCAA TGTTCGGGTC AGCATTGATC ATCACACCGT TGCTGCCCTG AATTCCTACG AATACGAATT ACTGGCGGAG AGTCAGAACA GAATAGAGAA ACTCATTGGT GATGTCAAGG CAACGGTGTC GACGGAGGAG AAGCAGCTGT TTGAAAGCGA AAGCCACGAG GAGTTGCTCG CCTTCTTCTT CGAAACGGCA AAAAAGGGGC TCTACATCCA GCGTTACAAA GGCTTGGGGG AAATGAACCC GGAACAGCTC TGGGAAACCA CCATGCATCC GGAAAACCGG GTACTGCTCC AGGTCAAGAT CGAAGATATC GTCGAAGCGG AAGAGATATT CACGGTGCTC ATGGGCGACC AGGTCGAACC GCGGCGTGAA TTCATCGAAC AGAATGCGTT GAATGTGTCG AATCTGGACA TTTAA
|
Protein sequence | MSDDTTSKDY GADKIKVLEG LSAVRKRPAM YIGSTSVQGL HHLVYEIVDN SIDEALAGHC DDILVTINVD GSVTVVDNGR GIPTDMHPTE GKSAAEVVLT VLHAGGKFDN SSYKVSGGLH GVGVSVVNAL SKKLELEIRR DGKLFRQSYR CGDPQGPLEV VGETKKRGTK ITFFPDDEIF ETTEFSFDTL SQRLREMAFL NAGVRIKIVD ERTEKVHEFF YEGGINSFVE YLNKNKTPIH PKPIYISGEK GGVEMEIAMQ YNDSYDEKIF TFANNINTHE GGTHLIGFKA ALTRTMNTYA NANNLLKNVK ENISGEDLRE GLTSVISVKI PQPQFEGQTK TKLGNSEVKG YVETLMNEKL ATYLEENPQI AKRILEKSID AARAREAARR ARDLTRRKGA LEVGTLPGKL ADCQEKDPAL CELFLVEGDS AGGSAKQGRD RKYQAILPLK GKILNVEKAR FDKMLSSQEI RTLIAALGTS IGKGDFDIAK LRYHRIIIMT DADVDGSHIL TLLLTFFFRQ MLEMIERGYL YIAQPPLYKI KRGRKEQYLK NEAALQNYLL EEGTEDMTLR LGSDERTYRG KQIIPLLKQL IEHNSLFGKV VKKGLNEELL KMFLKSGVKS GFEELRDLEP YLAKMKESFA GSDYVVSEQK IIFMIGNVRV SIDHHTVAAL NSYEYELLAE SQNRIEKLIG DVKATVSTEE KQLFESESHE ELLAFFFETA KKGLYIQRYK GLGEMNPEQL WETTMHPENR VLLQVKIEDI VEAEEIFTVL MGDQVEPRRE FIEQNALNVS NLDI
|
| |