| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3038 |
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| Symbol | |
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| ID | 3741234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3423571 |
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| End bp | 3424782 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637780327 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_385978 |
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| Protein GI | 78224231 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000167095 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT TCCTCATCCC CGCCGCTGCC GTCCTCGTGG TGGCCGGCGT TGCCGCGTAC
TTTACCCTGA ACAAAAAGCC GGAAACTGTG TTCAAGACCG CCAAGATCGA GCGGGGGGAT
ATTGTCTCCA CTGTCTCCGC CACCGGCAAC CTTGCCGCCG TGGTGACGGT ACAGGTGGGT
ACCCAGGTTT CCGGCACCAT CCAGAAGCTC TTTGTGGACT ACAACTCGCC GGTGAAAAAG
GGGCAGGTCA TCGCCCAGAT CGATCCTTCC CTGTTTTCGG CCCAGGTGGA GCAGACCCGG
GGAAACTACC TGAACGCCCA GGCCAACCTC CAGAGGGTGA GGGCTGATCT GGCAGATGCC
CGGCGCAACC AGGAGCGGAA CCGCCAGCTC CTCAAGGACG GCGTCGTCTC CCAGAGCGAT
TTTGACGCCG CCGACAACCG CTACCAGATG GCCCAGGCCA CCGTGAAAGC AGCCGAGGGA
AGCGTGGCCC AGACCCGCGG CGCCTTCAGC CAGTCGGAGA CCAACCTCCG CTATGCCACC
ATCCGTTCGC CCGTGGACGG CATCGTCGTC TCCCGCAACG TGGACGTGGG GCAGACCGTG
GCCGCCTCGT TCCAGACCCC GACCCTCTTC ACCATCGCCC AGGACCTGAC CCGCATGGAG
ATCGACACCA GCGTGGACGA GGCCGACATC AGCCGGGTGC AGGTGGGGCA GCCGGTCAGC
TTCACCGTGG ACTCCTATCC CGAGAACCGC TTCACCGGCA CCGTCCGCCA GGTGCGCAAC
GCACCGGTGG TCACCCAGAA CGTCGTGACC TACGTGGTGG TGATCGACGT GGACAACAAG
GACATGAAGC TCAAGCCGGG GATGACCGCC AATGTCAGCA TCGAGACCGC CCGCAAGGAC
AATGTCCTGA AGCTCCCTTC CGCTGCGCTC CGGTTCCGGC CCAAGAAGGG GGGTGATGAG
AAGGCGGCGA AGGGACAGCA GGCTGGCCAG GAGCAGCGGA GGAAAAAGCG GGAAGGTGGG
CAGCAGGTCT ACATCCTGGG GGCGGAGAAC AAGCCGGTTC CGGTGCCGGT TAAGACCGGC
ATCGGCAACG ATGGGCAGGT GGAACTGGTT TCCGGGAACC TCAAGGAAAA CGACCAGGTG
ATCATCGAAC AGGTTACCCC GCAGCAGAAA AAAGCGGGCG GCATGGGCGG ATCCATGGGG
CCGAGGTTCT AG
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| Protein sequence | MKKFLIPAAA VLVVAGVAAY FTLNKKPETV FKTAKIERGD IVSTVSATGN LAAVVTVQVG
TQVSGTIQKL FVDYNSPVKK GQVIAQIDPS LFSAQVEQTR GNYLNAQANL QRVRADLADA
RRNQERNRQL LKDGVVSQSD FDAADNRYQM AQATVKAAEG SVAQTRGAFS QSETNLRYAT
IRSPVDGIVV SRNVDVGQTV AASFQTPTLF TIAQDLTRME IDTSVDEADI SRVQVGQPVS
FTVDSYPENR FTGTVRQVRN APVVTQNVVT YVVVIDVDNK DMKLKPGMTA NVSIETARKD
NVLKLPSAAL RFRPKKGGDE KAAKGQQAGQ EQRRKKREGG QQVYILGAEN KPVPVPVKTG
IGNDGQVELV SGNLKENDQV IIEQVTPQQK KAGGMGGSMG PRF
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