Gene Gmet_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2407 
Symbol 
ID3740445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2722213 
End bp2722908 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID637779699 
ProductABC transporter-related protein 
Protein accessionYP_385357 
Protein GI78223610 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00257562 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA CCACCCCTCC CATCGTTGCC GTGCGCAACC TCTCCAAGTC GTACCGGCGG 
GGCCAGCAGA TCGTGCCGGT GCTTCAGGAT ATCTCCTTCG ACATCGCGCC GGGGGAGTTC
CTGGCCCTCA TGGGACCGTC GGGGTCAGGG AAGAGCACGC TCCTGAACCT CATCGCCGGC
ATCGACAAGG CCGACAGCGG TACCATCACC ATTGGCGGGG TGGAGATCAG CACCCTCCCC
GAGGCGGAGC TGGCCGCGTG GCGGGCCGGC AACGTGGGGT TCATCTTCCA GTTCTACAAC
CTGATCCCGG TGCTGACCGC CTTCGAGAAC GTGGAGTTGC CGCTCCTCCT CACGGGGCTC
ACCCGCCGGG AGCGGCGGGA GCATGTGGAG ACGGTCCTCT CTTTGGTGGG GCTCGCCGAC
CGGATTGACC ACTATCCCTC CCAGCTCTCG GGGGGACAGC AGCAGCGGGT CGCCATTGCC
CGGGCCATGG TCACCGACCC GGAGATCCTC GTGGCCGACG AGCCCACCGG CGACCTGGAC
CGGGTCTCGG CCGGGGAGAT CCTCGCGCTC ATGGAGCGCC TCGTCAGCGG TTTCGGCAAA
ACCATCATCA TGGTCACCCA CGACCCCCGG GCTGCCGAGC AGGCCCACCG GCTCCTCCAC
CTGGAGAAGG GGGAGCTGAC CGACGGGGCG GGGTAG
 
Protein sequence
MAETTPPIVA VRNLSKSYRR GQQIVPVLQD ISFDIAPGEF LALMGPSGSG KSTLLNLIAG 
IDKADSGTIT IGGVEISTLP EAELAAWRAG NVGFIFQFYN LIPVLTAFEN VELPLLLTGL
TRRERREHVE TVLSLVGLAD RIDHYPSQLS GGQQQRVAIA RAMVTDPEIL VADEPTGDLD
RVSAGEILAL MERLVSGFGK TIIMVTHDPR AAEQAHRLLH LEKGELTDGA G