| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0809 |
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| Symbol | |
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| ID | 3738967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 888033 |
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| End bp | 889211 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637778087 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_383776 |
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| Protein GI | 78222029 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.165865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAGAA CACGACTGAT TACCGTTACG GGGCTTCTTG CCATCGGGAT GATGGTGGCA
GGGTGCGGCA AGAAATCCAA CGGCGCCCCT CCTCCCAGCG GTCCTCCCGA AGTGGGAGTG
GTTACGATTC AGCCCCAACG GGTGGAGCTG ACGACTGAGT TGCCGGGCCG CACCTCGCCT
CACCTGATCG CCGAGGTCCG TCCCCAGGTC AGCGGCATCA TCCAGAAGCG CCTGTTCACC
GAGGGATCCG ACGTGAAGGC GGGTCAGGTC CTGTACCAGA TTGACCCCTC CACTTATCAG
GCGGCCTTTG CCAGCGCCAA GGCCACCCTT GCCCGGACGG AAGCCAATCT CATCCCGGCG
CGCCTCAAGG AAGAGCGCTT CCGTGATCTG GTGAAGATCA AGGCCGTGAG CCAGCAGGAC
TACGACGACG CCAACGCCGC CCTCAAGCAG GCCGAGGCCG ACGTCGCCTC TGCCAAGGCA
GCGGTTGAGA CGGCCCGCAT CAACTTGGGC TACACGAAGG TGACCGCCCC CATCTCCGGC
CGGATCGGCC GTTCCACCGT GACCGACGGG GCTCTGGTGA CGGCCAACCA GCCCACGGCC
CTGGCCACCA TCCAGCAGCT CAGTTCCATG TATGTGGATG TCACCCAGTC CAACGCCGAT
CTGTTGAAGC TGAAGCAGAA CCTGGCCAGC GGACTGATGA AACACGACGG TGCCGCCCAG
GCGCGGGTCA AGCTTCTGCT GGAGGACGGC AGCCCTTATC CGCTGTCGGG AACCCTGAAA
TTCTCGGAAG TCACCGTTGA CCAGAGCACC GGTTCCATCA CCCTGCGGGC GGTCTTCCCG
AACCCGAAGC AAACCCTCCT GCCGGGGATG TTCGTGCGGG CCATCGTTGA GGATGGTGTC
AGCGAACAAG CGATCCTGGT CCCCCAGCGG GGCGTCACCC GTAACCCGAA GGGCGATGCC
ACGGCTCTGG TGGTGGGGGC CGAGAACAAG GTGGAGTCAC GGGTCATCAA GGTCGCCCGG
ACCGTTGGGG ACAACTGGCT GGTGAGCGAC GGGCTCAAGG CCGGTGATCG GGTCATCCTG
GAAGGGATTC AGAAGGCAAA GCCGGGCACG CCGGTCAAGG CGGTGCCGTT CGGAGCAAAG
CCGGAGACGG CTCCGGCCCC AGCCGTCGTG AAAAAATAA
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| Protein sequence | MYRTRLITVT GLLAIGMMVA GCGKKSNGAP PPSGPPEVGV VTIQPQRVEL TTELPGRTSP
HLIAEVRPQV SGIIQKRLFT EGSDVKAGQV LYQIDPSTYQ AAFASAKATL ARTEANLIPA
RLKEERFRDL VKIKAVSQQD YDDANAALKQ AEADVASAKA AVETARINLG YTKVTAPISG
RIGRSTVTDG ALVTANQPTA LATIQQLSSM YVDVTQSNAD LLKLKQNLAS GLMKHDGAAQ
ARVKLLLEDG SPYPLSGTLK FSEVTVDQST GSITLRAVFP NPKQTLLPGM FVRAIVEDGV
SEQAILVPQR GVTRNPKGDA TALVVGAENK VESRVIKVAR TVGDNWLVSD GLKAGDRVIL
EGIQKAKPGT PVKAVPFGAK PETAPAPAVV KK
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