Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3178 |
Symbol | |
ID | 6365935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3397078 |
End bp | 3397965 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642678595 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_001953404 |
Protein GI | 189426227 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC AATTCAGTGT AGCAAAAGAG ATGGCCGGTC AGCGTCTTGA TGAAACCTTG GCGCAACTGG CGGGAATCAG CAAAGGTGAG GCTCGGCGGA TCATTGACCG GGGTGGCTGT GCGGTTAATC AGGCCATGGT GCGGGTGGCT TCCAGAGGCA TGAAGGCCGA AGACCAGCTG ACAGTTGGTT TTATGGAACA GGGCAGATTC CTGGAACTGC TGCTGCCACC TGAGGCAATT GTCTATCAGG ATAAGGAACT GCTGGCAATC AACAAGCCTT CCGGTATTGC CAGCCAGCGT ACTCCGTATC AGCTGAAAGG AACGCTGGAA TACTGGGTTG CCGAGGAGTT TGTGCGCCAG GGAATTAAAG AACCGGTGCG GGTGGTGCAC CGGCTTGACC GGGGGACATC GGGGCTGATG CTGTTTCCCA AGCATCGTCA GGCAGCGGCC TGGCTTTCTG AGCTGTTTAA GCAGGGGGGG ATTCAGAAAC GTTATCTGGC GCTGGTTACG GGTAAACCTG TTGAAGAGCG CTGGTCCTGC GATGGCCCGA TCGGCAAACT GGGCAGTGCA CGGTGGGGAA TCATGTCTGA AGGCAGGGCA GCCCTGACTG ATTTCCGGCT GCTTGCTGCT GCAGAAGGCC TGGCACTGGT TGAGGCCTTT CCGCGAACCG GACGAACCCA CCAGATCCGG GTTCACCTTT CAGCAGCCGG CCTTCCGATT GTGGGGGATG CTACCTATGG TGGCCTGGTG TCTGAACGGC TTATGTTGCA TTGTGCCGGG TTGCAGTTTG CCGGGCGGCA TGGTCTGCCC TGTAACCTGG AGGCGTTGCC GGACAGTTCG TTTATTGGCC GCTGCGGTCT CTGCTGGGAT GCCGTGCCGA AGAGATAA
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Protein sequence | MIKQFSVAKE MAGQRLDETL AQLAGISKGE ARRIIDRGGC AVNQAMVRVA SRGMKAEDQL TVGFMEQGRF LELLLPPEAI VYQDKELLAI NKPSGIASQR TPYQLKGTLE YWVAEEFVRQ GIKEPVRVVH RLDRGTSGLM LFPKHRQAAA WLSELFKQGG IQKRYLALVT GKPVEERWSC DGPIGKLGSA RWGIMSEGRA ALTDFRLLAA AEGLALVEAF PRTGRTHQIR VHLSAAGLPI VGDATYGGLV SERLMLHCAG LQFAGRHGLP CNLEALPDSS FIGRCGLCWD AVPKR
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