| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1653 |
|---|
| Symbol | |
|---|
| ID | 6368448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 1760967 |
|---|
| End bp | 1762673 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642677057 |
|---|
| Product | type IV-A pilus assembly ATPase PilB |
|---|
| Protein accession | YP_001951889 |
|---|
| Protein GI | 189424712 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | [TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGA GCCGCCTTGG CGATATTCTG GTTAAAAACA ATATCATTAC CAGTGAACAG
CTGAGCGCTG CGTTGCAGGA ACAGAAGATG TCCGGCGGCC AGAGTAAGCT GGGCTCCATT
CTGGTCAAGC AGGGACTGAT CAAAGAGCCT GATCTGGTGT CGTTTCTCTC GCGTCAGTAT
GGGGTCCCCA CCATCTGTCT TGCTGAATAT GAGATTGATC CTGCTGTCAT AAAGATCATC
CCTCCTGAAG TTGTTCAAAA ATACAACCTG ATACCGGTCA ACCGGGCCGG CTCAACCCTG
ATCGTAGCGG TCAGTGATCC CTCCAACCTG TTTGCCATCG AAGATATCAA GTTCATGACC
AGCTACAACG TTGAGATGGT TGTGACCGGC GAGTCTGATA TCAAAGGGGC CATAGACAAG
TATTACGACC AGTCCGCATC CCTGGCGGAT GTGATGGATA ACCTGGATAT GGAGGATCTG
GAACTGGTGG ACACCGAGGA AGAGGTGGAT GTCTCCTCCC TTGAACGTGC CACCGAAGAT
GCTCCGGTTG TCAAACTGGT AAACCTGATT TTGATGGATG CCATCAAGAA GAAGGCCAGT
GATATCCATA TTGAACCCTA TGAAAAGACC TTTCGGGTCC GCTACCGGAT AGATGGTGTC
TTGTACGAAG TAATGAAACC TCCCATGAAG TTGAAGAATG CCATCACCTC CCGGATCAAG
ATCATGGCGG AGCTGGATAT TGCCGAGCGC CGCTTGCCGC AGGATGGCCG GATCAAGATC
AAGCTGGGAG GCGGCAGAGA CATGGACTAC CGGGTTTCAT GTCTTCCAAC GCTTTTTGGT
GAGAAGATCG TCTTGCGGCT GCTTGACAAA AGCAACCTGC AGACCGACTT GACCAAACTG
GGGTACGAAC CGGATGCATT GGCCCACTTC AAGCGCGAGA TCCATAAGCC GTTCGGCATG
GTACTGGTGA CCGGTCCCAC CGGCTCCGGT AAGACGGTGT CGCTCTATTC GGCGCTGTCT
GAACTGAACA AGGTGACGGA AAATATCTCC ACTGCAGAAG ATCCGGTTGA GTTTAACTTT
GCCGGCATTA ATCAGGTGCA GATGCATGAA GATATCGGAT TGAACTTTGC CGCAGCCCTG
CGTTCCTTTC TGCGTCAGGA TCCGGATATC ATCATGATCG GTGAGATCCG GGACTTTGAA
ACGGCTGAAA TTGCCGTCAA GGCCGCTCTG ACCGGACACT TGGTGCTTTC CACCCTGCAT
ACCAACGATG CGCCGGCAAC GATCAACCGT CTGCTTAACA TGGGCATAGA GCCGTTTCTG
GTGGCCTCTG CCGTCAACCT GATTACTGCC CAGCGTCTGG CTCGACGTGT CTGTGGTGAG
TGCAAAGAAA AAGAGGATAT CCCGGTCCAG GCCCTGATTG ATGCAGGAGT ACCTCCCGAT
GAGGCCTCTG AGTATGTCTG CTATAAAGGC AGGGGATGCC CTGCGTGTAA TAATACCGGA
TACAAGGGGC GGGTCGGTTT TTACCAGGTC ATGCCGATGC TCGAACCGAT CCGGGAACTG
ATCCTGAACG GAGCCAATAC GGCTGAGATC AAGCGGGAAT CAATGCGGCT CGGCATTAAG
ACCATGCGTC AGTCCGGTCT AACCAAGATC AAAGAAGGTG TTACATCTCT CGAAGAGGTT
TTGCGGGTAA CGGTTTCCGA CGAGTAA
|
|---|
| Protein sequence | MQTSRLGDIL VKNNIITSEQ LSAALQEQKM SGGQSKLGSI LVKQGLIKEP DLVSFLSRQY
GVPTICLAEY EIDPAVIKII PPEVVQKYNL IPVNRAGSTL IVAVSDPSNL FAIEDIKFMT
SYNVEMVVTG ESDIKGAIDK YYDQSASLAD VMDNLDMEDL ELVDTEEEVD VSSLERATED
APVVKLVNLI LMDAIKKKAS DIHIEPYEKT FRVRYRIDGV LYEVMKPPMK LKNAITSRIK
IMAELDIAER RLPQDGRIKI KLGGGRDMDY RVSCLPTLFG EKIVLRLLDK SNLQTDLTKL
GYEPDALAHF KREIHKPFGM VLVTGPTGSG KTVSLYSALS ELNKVTENIS TAEDPVEFNF
AGINQVQMHE DIGLNFAAAL RSFLRQDPDI IMIGEIRDFE TAEIAVKAAL TGHLVLSTLH
TNDAPATINR LLNMGIEPFL VASAVNLITA QRLARRVCGE CKEKEDIPVQ ALIDAGVPPD
EASEYVCYKG RGCPACNNTG YKGRVGFYQV MPMLEPIREL ILNGANTAEI KRESMRLGIK
TMRQSGLTKI KEGVTSLEEV LRVTVSDE
|
|---|
| |