Gene Gbem_0933 details

Gene Information

• Locus tag: Gbem_0933
• Symbol: rplC
• ID: 6783775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1098071
• End bp: 1098706
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642766910
• Product: 50S ribosomal protein L3
• Protein accession: YP_002137750
• Protein GI: 197117323
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00137042
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGG GATTGATTGG GAAAAAGCTG GGGATGACCC AGATATTCGC CGAAGACGGC 
AGGCGCATCG CTGTGACCGT CGTCGAGGCT GGGCCGTGCG TCGTCGTCCA GAAGAAGAGC 
GTGGCAAAGG ACGGCTACTC CGCCATACAG GTCGGTTTCG GAGCGAAGGA CGCCTCCAGG 
GCGAACGCAG CACAGGTCGG GCACTGCAAA GGCGCCGGCG CCGGCGTGTT CACCCACTAC 
CGCGAACTGC GCATGGACAA CACGGACGCC TACAAATTGG GCGACGTGAT CGAGGCTGCG 
GTTTTCGAGG AAGGCGACCT GGTCGACGTG ACCGGCACCT CCATCGGTAA GGGCTTTGCC 
GGCGTCATCA AGCGCTGGGG CTTCAAAGGC GGGCGGTCGA GCCACGGCTC CCGTTTCCAC 
CGCGCCCCGG GTTCCATCGG CTGCTCCGCG ACCCCCTCCA GGGTTTTCAA GAACAAGAAG 
ATGCCGGGCC AGCTCGGTAA CGAGAAGGTG ACCGTGCAGC GCCTCAAGGT GGTTCGCGTT 
GACGCTGCTG ACAATCTGAT TCTGCTCGGT GGAGCGATCC CCGGTTCCGC CAACGGCGTC 
GTCCTGATCA AGGACTCCGT CAAGGCGAAG AAATAA 

 

Protein sequence

MNKGLIGKKL GMTQIFAEDG RRIAVTVVEA GPCVVVQKKS VAKDGYSAIQ VGFGAKDASR 
ANAAQVGHCK GAGAGVFTHY RELRMDNTDA YKLGDVIEAA VFEEGDLVDV TGTSIGKGFA 
GVIKRWGFKG GRSSHGSRFH RAPGSIGCSA TPSRVFKNKK MPGQLGNEKV TVQRLKVVRV 
DAADNLILLG GAIPGSANGV VLIKDSVKAK K