| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0136 |
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| Symbol | |
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| ID | 6782958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 166156 |
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| End bp | 169506 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766102 |
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| Product | trehalose synthase |
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| Protein accession | YP_002136963 |
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| Protein GI | 197116536 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAGC GCAGCGACAA AAACCCGCTC TGGTTCAAGG ACGCCATCGT CTACGAGGTG
CACATCAGGA GTTTTTGCGA CAGCAACGGG GACGGCATCG GAGACTTCCG GGGGCTGTTG
CAAAAACTCC CCTACCTGCG CGACCTGGGG ATCACCGCCA TCTGGGTGCT CCCCTTCTAT
CCCTCTCCCC TGAAGGACGA CGGCTACGAC ATCGCCGACT ACCGCAGCGT TCACCCGGAC
TACGGCACCC TGCGCGATTT TCAGGACTTC CTGAAGGGTG CCCACGCCCT CGGCATGCGG
GTCATCACCG AGCTGGTCTT AAACCACACC TCGGACCAGC ACCCCTGGTT CCAGAAATCC
CGCACCTCGA AGCCGGGCTC CCCCTGGCGC GACTTTTACG TCTGGTCCGA CACCCCCGAC
AAGTACCTGG ACGCCCGCAT CATCTTCAAG GATTTCGAGG TCTCCAACTG GACCCGCGAT
CCCGTCGCCA AGAGCTACTT CTGGCACCGG TTCTATTCGC ACCAGCCCGA CCTCAACTAC
GACAATCCCC GGGTGCACGA GGCGATGTTC CGGGTCATCG ACTTCTGGCT GGGGATGGGG
GTGGACGGCC TCAGGCTCGA CGCCGTCCCC TACCTCTACG AGCGTGAGGG GACCAACTGC
GAGAACCTGC CGGAAACCTA CGAGTTCCTG AAGAAGCTGC GCGCCTACAT CGACGCCAAG
TACCCGGACC GGATGCTCCT GGCCGAGGCC AACCAATGGC CGGAGGACGC AGCCTCCTAT
TTCGGGGGGG GAGCCGCCTG CCAGATGTGC TTCCATTTCC CGCTCATGCC CCGCATGTTC
ATGGCGCTGC AGATGGAGGA TTCCTTCCCC ATCATCAACA TCCTGCAGCA GACCCCGGTC
ATACCGCAGC AGTGCCAGTG GGCGCTCTTC CTAAGAAACC ACGACGAGCT CACCCTGGAG
ATGGTGACCG ACGAGGAGCG GGACTACATG TACCGGATCT ACGCACGCGA CCCGAGGGCG
CGCATCAACC TGGGGATCCG GCGCCGGCTG GCGCCGCTCA TGGGGGACGA CCGGCGCAAG
ATAGAGCTGA TGAACGTCCT TCTTTTCTGC CTTCCCGGCA CCCCCATCAT CTACTACGGC
GACGAGATCG GCATGGGGGA CAACTATTAT CTCGGCGACC GCAACGGGGT GCGCACGCCG
ATGCAATGGA GCCCGGACCG AAACGCCGGC TTCTCCCCGG TGAACCCGCA AAAGCTCTAC
CTCCCCGCCA TCATCGACCC GGAGTACCAC TACGAGGCGC GCAACGTCGA GAACCAGGCG
AAGAACCCCT CTTCGCTTCT TTGGTGGATG AAGCGGATGA TCGATCTGAG GAAGCGGTTC
AAGGCCTTCG GCTGGGGGAG CGTCGAGTTC ATGCCGATTG AGAACTCCAA GGTGCTGGCC
ATGGTCAGGA AATATGAGGA TCAGTCCATC GTGGTGCTGA TCAACCTATC CCGTTCCACG
CAGTTCGTGC AGGTGAACCA GCCGCGCTTC GCCGGCTTTT ATCCCGAGGA GATGTTCAGC
CGCAACCGGT TCCCGGTCAT CAAGGACTCC CCTTATGGCG TCATCCTGGG AGCTTACGAT
TACCACCTTC TGCTCATGAA GGACGGAAGC GAAGAGGTCA AGCCTCGGGA GGAGGGGGTG
CTGGAAGAGG TTCCGGTCAC CGGCAGCTGG GAAAACGTGC TGAGGTCGGC GGGGCTCAGG
CAGCTGGAAC AGTCGGTCCT TCCCGAATAC CTGAAGAGGT CCCGCTGGTT CCAGGGGAAG
AGCCGGATCA TGGTCCGCTT TTCGGTGATG GAGAAGGTAC CCGTCCCGGT CAACAGCTCC
TCGGTCATCC TCACGCTTTT GGAGGTGAGC TACAGCGAGG GGGCGCCGGA GACCTACCTG
CTGCCGCTGC ATTTCGTCCC CATGGACGGC GGAGGCGAAG GGATCCTTAC CGAGACGCCG
GCCGCCGTCG TCTGCAAGCT GCGCATCGGC GACAAGGTCG GAGTCCTCTA CGACGGCACC
TACAACTCTC ACTTCCGCTG GTCGCTTTTC GAGATGATCT GGCGCCGCAA GGCGATCCGC
ACCGACGGGG GGAGGCTCTC CGGGCGCCCG GCCGGCGGGA TGGGCGCGCT CATGGAAGGG
AAGGAGCCTC CGTTCGTCTC CCAGGTGGGG AAATCGGAGC AGAGCAACAC CTCGATGCTC
TTCGACAAGC ACTTCTTCCT GAAGCTGTAC CGGCGCCTGG AGGAGGGGGC GCATCCGGAA
GTGGAGATCG GGAGGTTCCT CTCGGACCGG ATCCATTTCC AGCACGTGGC GCCCCTGGCC
GGGACCATCG AGTACCGGCG ACCCGGGCTG GAGCCGGTGG CTATCGGGAT GCTGCAGGCC
TTCGTCCCCA ACCAGGGGGA TGCCTGGGCC TTCACCCTCG GGGAAGCGGG GCAGTTCATC
GATCGTGTGC TGGCCCATCG CGAGGAGGCG AAGGAATCTG GGACTCCCGC CGTCGCCCAA
CCGGACACCG CGGCCACCGG CTTCTCCACC GTGCTGCATG ATCTGATCCA GGGGTTGTAC
CCGGAGATGG TGGCCCTGAT CGGAAAGCGC ACGGCGGAGC TGCACCTGGC CCTTTCCTCC
CGCAGCGACG ACCCCTCCTT CGCGCCCGAA CCCTTTGCGC TTCTTTACCA GCGCTCGGTG
TACCAGTCGA TGCGCAGCCG CACCAGGAAG GTCTTCGACC TCTTACGCCG GAACCTGGGC
CGGCTTCCCC AAGAACTAGT GCCGGAGGCC GAGGCGCTTC TGGGGATGGA ACCGGAGGTG
CAGGGAGCCC TGCAGAAGTT CACCGCCAGC AAGTTTTCGG CGATGAAGAC GCGGGTGCAT
GGCGACTACC ATCTGGGGCA ACTCCTCTAC ACCGGAGACG ATTTCCTGAT CATGGACTTC
GAAGGGGAAC CGGTGAAATC CCTGGGAGAG CGCCGGATCA AGCAGTCGCC GCTCAGGGAC
GTGGCGGGGA TGATGCGCTC CTTCGAGTAT GCCGCCCACG CCGTGCTCAT GCAGAGGCCC
CAGGTCCGGG AAGAGGACGT AGCCTTCCTG CTCCCCTGGA TCCAGGCTTG GTGCCGGTAC
AACTCCGCCC TTTTCCTCGC CTCCTACCAA AAGGGGGTGG AAGGTTGCAA CTTCATGCCG
GACCACCCGC AGGACGTGGA GACGATGCTG CGCTGCTTCA TGCTGGACAA GGCAATCTAC
GAACTGGGGT ACGAACTGAA CAACCGCCCG CACTGGGTCT CGATACCGCT GCGGGGCATT
GTGAACCTGC TGGCGTCGGA AAAGAGCGGT CCCAAGCTGG GGGGGCAATG A
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| Protein sequence | MPQRSDKNPL WFKDAIVYEV HIRSFCDSNG DGIGDFRGLL QKLPYLRDLG ITAIWVLPFY
PSPLKDDGYD IADYRSVHPD YGTLRDFQDF LKGAHALGMR VITELVLNHT SDQHPWFQKS
RTSKPGSPWR DFYVWSDTPD KYLDARIIFK DFEVSNWTRD PVAKSYFWHR FYSHQPDLNY
DNPRVHEAMF RVIDFWLGMG VDGLRLDAVP YLYEREGTNC ENLPETYEFL KKLRAYIDAK
YPDRMLLAEA NQWPEDAASY FGGGAACQMC FHFPLMPRMF MALQMEDSFP IINILQQTPV
IPQQCQWALF LRNHDELTLE MVTDEERDYM YRIYARDPRA RINLGIRRRL APLMGDDRRK
IELMNVLLFC LPGTPIIYYG DEIGMGDNYY LGDRNGVRTP MQWSPDRNAG FSPVNPQKLY
LPAIIDPEYH YEARNVENQA KNPSSLLWWM KRMIDLRKRF KAFGWGSVEF MPIENSKVLA
MVRKYEDQSI VVLINLSRST QFVQVNQPRF AGFYPEEMFS RNRFPVIKDS PYGVILGAYD
YHLLLMKDGS EEVKPREEGV LEEVPVTGSW ENVLRSAGLR QLEQSVLPEY LKRSRWFQGK
SRIMVRFSVM EKVPVPVNSS SVILTLLEVS YSEGAPETYL LPLHFVPMDG GGEGILTETP
AAVVCKLRIG DKVGVLYDGT YNSHFRWSLF EMIWRRKAIR TDGGRLSGRP AGGMGALMEG
KEPPFVSQVG KSEQSNTSML FDKHFFLKLY RRLEEGAHPE VEIGRFLSDR IHFQHVAPLA
GTIEYRRPGL EPVAIGMLQA FVPNQGDAWA FTLGEAGQFI DRVLAHREEA KESGTPAVAQ
PDTAATGFST VLHDLIQGLY PEMVALIGKR TAELHLALSS RSDDPSFAPE PFALLYQRSV
YQSMRSRTRK VFDLLRRNLG RLPQELVPEA EALLGMEPEV QGALQKFTAS KFSAMKTRVH
GDYHLGQLLY TGDDFLIMDF EGEPVKSLGE RRIKQSPLRD VAGMMRSFEY AAHAVLMQRP
QVREEDVAFL LPWIQAWCRY NSALFLASYQ KGVEGCNFMP DHPQDVETML RCFMLDKAIY
ELGYELNNRP HWVSIPLRGI VNLLASEKSG PKLGGQ
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