| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GYMC61_0888 |
|---|
| Symbol | |
|---|
| ID | 8524711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. Y412MC61 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013411 |
|---|
| Strand | + |
|---|
| Start bp | 890077 |
|---|
| End bp | 891738 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_003252037 |
|---|
| Protein GI | 261418355 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA AGCAGGAACG GAAACGGCTT GGTGATTTGC TTGTCGAAGC GGGATTGATC
ACCGAAAGTC AGCTGGCCGA GGCGCTGCGC GAGAAGGCGC CCGGGCAAAA GCTCGGCGAC
GCCTTGTTGC AGCGCGGCTA CATCACGGAA CAGCAGCTGA TTGAGGCGCT CGAGTTTCAG
CTCGGCATTC CGCACGTCAG TTTGTACCGG TACCCGATCG ATCCGAAAGC GACAAACCTC
GTGCCGAAAG AGTTTGCCCG CCGCCATATG GTCATGCCGC TCAAGGTGGA AGGCGATCGG
CTGCTCGTTG CCATGGCCGA TCCGATGGAT TTTTTTGCCA TCGACGATTT GCGCCTGTCG
ACCGGGTTTC AAATTGAAAC GGCGATCGCT TCAAAAGACG ATATTTTGCG GGCGATCAAT
AAATATTACG ACATCGACGA AGCATTTGAG GATTTTTTGC AAACGCCGCC TGAGGTGCGC
GACGACGAGC GGGCTGCTGA GGACGATTCT CCCATCGTTC GTTTGGTGAA CCAAATTTTG
CAGCTTGCTG TTGAACAGCG GGCGAGCGAC ATTCATATCG ATCCACAGGA GACGAAAGTG
CTCATCCGCT ATCGGATCGA CGGCCTGCTT CGCACCGAGC GCGCGCTGCC GAAACATATG
CAAAGCATGT TGACGGCGAG AATTAAAATT TTGGCCAATA TGGACATCAC CGAACACCGC
GTGCCGCAAG ACGGACGGAT CAAAATGGAC ATCGATTTTC ATCCGGTCGA TTTGCGCGTT
TCAACGCTGC CGACCGTATA CGGTGAGAAA ATCGTCATGC GCGTCCTCGA CTTGGGCGCA
GCTTTAAACG ATATTCATAA ACTTGGCTTC AATCCGGTTA ATTTAGATCG ATTCATCCGC
TTGATCGAGC GGCCGAACGG CATCGTCTTG ATCACCGGAC CGACCGGTTC GGGGAAATCG
TCGACGCTCT ATGCGGCGCT CAACCATTTA AACAGCGAGC ACGTGAACAT TATTACGATT
GAAGATCCAG TCGAATATCA GATCGAGGGC GTCAACCAAA TTCAAGTCAA CCCGAATGTC
GGCTTGACGT TCGCCCAAGG GCTCCGCTCG ATTTTGCGTC AAGACCCGAA CATCATCATG
GTTGGAGAGA TTCGCGACCG CGAGACGGCG GAAGTGGCGA TCCGCGCTTC GCTCACCGGT
CATTTAGTGT TGAGCACGCT CCATACGAAC GATGCATTAA GCACGATCAC CCGCCTGATC
GATATGGGGA TTGAGCCGTT TTTAGTGGCC ACATCGCTCG CCGGCGTTGT CTCGCAGCGG
CTTGTGCGCC GCGTCTGCCG CGACTGCCAA GAGGTGTATG AGCCGACGAA GCGGGAGCTG
GACATTTTCG CCCGCCGCGG CATCGAGGTT CATCAACTTG TCCGCGGCCG CGGCTGCCCG
ATGTGCAACA TGACCGGTTA CCGCGGACGG CTGGCGATTC ACGAGTTGCT TGTTGTCACC
GATGAGATGC GGCGCGTCAT TTTAAACAAC GAGCCGTTTT CGAAATTGCG CGAGCTTGCC
CTGCAAAACA AAATGATTTT TTTGCTGGAT GATGGGCTGT TGAAAGTGAA GCAAGGGTTG
ACCACGCTTG AAGAAGTGCT GAAAGTGGCC ATTTTGCATT GA
|
|---|
| Protein sequence | MSKKQERKRL GDLLVEAGLI TESQLAEALR EKAPGQKLGD ALLQRGYITE QQLIEALEFQ
LGIPHVSLYR YPIDPKATNL VPKEFARRHM VMPLKVEGDR LLVAMADPMD FFAIDDLRLS
TGFQIETAIA SKDDILRAIN KYYDIDEAFE DFLQTPPEVR DDERAAEDDS PIVRLVNQIL
QLAVEQRASD IHIDPQETKV LIRYRIDGLL RTERALPKHM QSMLTARIKI LANMDITEHR
VPQDGRIKMD IDFHPVDLRV STLPTVYGEK IVMRVLDLGA ALNDIHKLGF NPVNLDRFIR
LIERPNGIVL ITGPTGSGKS STLYAALNHL NSEHVNIITI EDPVEYQIEG VNQIQVNPNV
GLTFAQGLRS ILRQDPNIIM VGEIRDRETA EVAIRASLTG HLVLSTLHTN DALSTITRLI
DMGIEPFLVA TSLAGVVSQR LVRRVCRDCQ EVYEPTKREL DIFARRGIEV HQLVRGRGCP
MCNMTGYRGR LAIHELLVVT DEMRRVILNN EPFSKLRELA LQNKMIFLLD DGLLKVKQGL
TTLEEVLKVA ILH
|
|---|
| |