| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3341 |
|---|
| Symbol | |
|---|
| ID | 7979224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3367103 |
|---|
| End bp | 3368242 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644800108 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002951247 |
|---|
| Protein GI | 239828623 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTC AGTTAAGTGA AGAGCATGAA ATGATAAGAA AAATGGTGCG CGAATTTGCT
GAAAAAGAAG TAGCACCGAC TGCAGCCGAA CGGGATGAAG AAGAACGATT TGACCGCGAA
ATTTTTAATA AAATGGCTGA ATTAGGCCTT ACCGGAATTC CATGGCCGGA AGAGTACGGC
GGTATCGGCA GCGATTATTT AGCGTATGTC ATCGCAGTAG AGGAGCTATC GAGAGTATGC
GCGTCTACCG GGGTAACGTT GTCTGCGCAC ATTTCACTCG CAAGCTGGCC GATTTACAAA
TTCGGCACAG AAGAACAAAA GCAAAAATAT TTGCGCGCGC TTGCGACAGG TGAAAAACTT
GGCGCATATG GCCTTTCGGA ACCAGGTGCC GGTTCGGACG TCTCCTCCAT GAAAACGAGG
GCTGTAAGAG ATGGCGACTA TTACGTGCTA AACGGCTCGA AAGTATGGAT CACCAACGGC
GGCGAAGCGG AAATTTACGT GGTGTTCGCC GTAACCGATC CAGAAAAGCG CCATAAAGGA
ATCAGCGCCT TTATCGTTGA AAAAGGCACA CCAGGCTTTT CGATCGGGAA AAAAGAGAAA
AAACTCGGCA TTCGTTCATC GCCGACAACC GAGCTTATTT TTGAAGATTG CCGCATTCCG
AAAGAAAACC TTCTCGGGCA AGAAGGGGAA GGATTTAAAA TCGCGATGAT GACGCTTGAC
GGCGGCCGAA ATGGAATCGC TGCACAAGCG GTCGGTATCG CGCAAGGAGC CTTAGACGCA
GCGATTGAAT ATGCAAAACA ACGGGTGCAA TTTGGCAAAC CGATCGCTGA ACAGCAAGGA
GTTGCTTTTA AACTTGCTGA TATGGCGACC GCCATCGAAG CGGCGCGCCT GCTTACGTAT
CAAGCGGCAT GGCTCGAAAC AAACGGTCTT CCGTACGGCA AAGCATCGGC GATGGCGAAA
TTGTTTGCCG GCGATACAGC GATGAAAGTA ACGGTCGATG CCGTGCAAAT TTTCGGAGGC
TACGGCTATA CGAAAGATTA TCCAGTCGAA CGGTTTATGC GCGACGCAAA AATTACACAA
ATTTATGAAG GAACGCAAGA AATTCAACGT CTCGTTATTT CGCGGATGCT TACAAGATAA
|
|---|
| Protein sequence | MNFQLSEEHE MIRKMVREFA EKEVAPTAAE RDEEERFDRE IFNKMAELGL TGIPWPEEYG
GIGSDYLAYV IAVEELSRVC ASTGVTLSAH ISLASWPIYK FGTEEQKQKY LRALATGEKL
GAYGLSEPGA GSDVSSMKTR AVRDGDYYVL NGSKVWITNG GEAEIYVVFA VTDPEKRHKG
ISAFIVEKGT PGFSIGKKEK KLGIRSSPTT ELIFEDCRIP KENLLGQEGE GFKIAMMTLD
GGRNGIAAQA VGIAQGALDA AIEYAKQRVQ FGKPIAEQQG VAFKLADMAT AIEAARLLTY
QAAWLETNGL PYGKASAMAK LFAGDTAMKV TVDAVQIFGG YGYTKDYPVE RFMRDAKITQ
IYEGTQEIQR LVISRMLTR
|
|---|
| |