| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3315 |
|---|
| Symbol | |
|---|
| ID | 2686483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3640042 |
|---|
| End bp | 3641286 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637128009 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | NP_954355 |
|---|
| Protein GI | 39998404 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAC GTTGGCGGAT ATTTGCCGTA TTTGCGGTTA TGTATCTGGT CGCCTATTTC
TACCGGGTAT CCATGGCGGT CATTGCCCGT GACCTGGCAG CCGATCTCGT CTTGGACGCC
TCCCGGATCG GGATGCTCTC GGGGGCGCTC TTCTACGCCT TCGCCCTGGC CCAGATACCG
CTCGGCCCGC TGCTGGACCG TTTCGGCGGC CGCATCGTGG TGAGCCTGGC CGGGCTCGTT
ACGGTGGCGG GCTCCATCAC CTTTGCTCTG GCTCCGGGCT ACGGCGCCCT GCTCGCAGGG
CGCATCCTCA TCGGCATGGG CACTGCCTGC GTCCTGATGG GGGCGCTCAA GGTGTTCACT
AACTGGTTCA CCTCCCGGGA GTATGCCACC ATCTCGGGCC TGATTATTGC CGTGGGGAAT
GTTGGAAATC TTTGTGCCAC GGCCCCTCTG GCCCTGGCGG TATCGCTTGG AGGGTGGCGC
TCTCCCTTCC TGGTGGTGGG CGCTCTCCAG CTGGGGCTTA CCCTGCTCCT CTTCCGGGTC
GTGCGGGATC GGCCGATCGC CGACGGGATA GCAGAGGAGG AGCCCCTCCT GGCCGCGACC
CACCGGCCGG TGGGAGCCCT GGCGGGGTGG GGTCTCGTTT TCTCTCGTCC CTCCTTCTGG
CTCCTGGCCC TCCTTTCGTT TTTCTGGTAC GCCGGCTACA TGGCTCTCCA GGGCCTCTGG
GGCGGGCCAT GGCTCATGGA GGTGATGGGC CTTTCGCGCC AGGGCGCCGG TAACCTGCTT
TTGCTTACCT CGGTCGGGTT CATGACCGGC TGCCTCTTCA TCGGCCAAGT GACCGACCGG
CTGCTCAAGT CCCGTAAATG GACCCTTGTG GCGGGGCAGA GCCTTCTGCT GTTTCTGCTT
CTGGTTCTGA CCCTCGGCCC GGCGGAGCAG GTGCCCCGCT GGCTTCTGGC CGCCTTCTTC
TTCGCAGCGG GGCTGGCGGT TTCATCGGGC GTGGCCATCT ATCCCATGAT CCGGGAGATG
TTTCCCAGCA CTCTGTCGGC AACGGCTACC ACTGCACTCA ATTTTTTCGT CCTGACCGGC
GCGGCCGTGG TACAGCAAGT GATGGGGTTC ATCATCGGGC GTTTCCCGCG CGGGCCGATG
GGCTATCCGG CCGAGGCCTA TCACGCAGCC TTTCTGGTAC CGGTGACGGG GCTGGCTGTG
GCCGTAACCC TGTTCCTCTT CGCCCGCGAC ACCTCGCCCC GGTGA
|
|---|
| Protein sequence | MTKRWRIFAV FAVMYLVAYF YRVSMAVIAR DLAADLVLDA SRIGMLSGAL FYAFALAQIP
LGPLLDRFGG RIVVSLAGLV TVAGSITFAL APGYGALLAG RILIGMGTAC VLMGALKVFT
NWFTSREYAT ISGLIIAVGN VGNLCATAPL ALAVSLGGWR SPFLVVGALQ LGLTLLLFRV
VRDRPIADGI AEEEPLLAAT HRPVGALAGW GLVFSRPSFW LLALLSFFWY AGYMALQGLW
GGPWLMEVMG LSRQGAGNLL LLTSVGFMTG CLFIGQVTDR LLKSRKWTLV AGQSLLLFLL
LVLTLGPAEQ VPRWLLAAFF FAAGLAVSSG VAIYPMIREM FPSTLSATAT TALNFFVLTG
AAVVQQVMGF IIGRFPRGPM GYPAEAYHAA FLVPVTGLAV AVTLFLFARD TSPR
|
|---|
| |