| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3281 |
|---|
| Symbol | trx |
|---|
| ID | 2688268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3600648 |
|---|
| End bp | 3600977 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637127973 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | NP_954321 |
|---|
| Protein GI | 39998370 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTG ACAAAGTCCT CACATTCAGT GACGATACCT TCGATAGCGA GGTGCTCAAG
TCGCCCGTTC CGGTTCTCGT TGATTTTTGG GCCACCTGGT GCGCCCCCTG CAAGGCCATC
GCTCCTGTCA TCGATGCCAT TGCCGACGAA TTTGACGGAA AAGTGAAGGT CGGCAAGGTT
AATGTTGATG ATAACCCCGG AACTCCGGGC AAGTACGGCG TGCGCGGCAT CCCTACCGTT
ATCCTCTTCA AGGAGGGCAA GGTCGTGGAT CAGGTCGTCG GGGCCGTGCC CAAAGCCCAA
CTTGAGGCGC TTATCAAAAA AGCGCTGTAA
|
|---|
| Protein sequence | MASDKVLTFS DDTFDSEVLK SPVPVLVDFW ATWCAPCKAI APVIDAIADE FDGKVKVGKV
NVDDNPGTPG KYGVRGIPTV ILFKEGKVVD QVVGAVPKAQ LEALIKKAL
|
|---|
| |