Gene GSU2840 details

Gene Information

• Locus tag: GSU2840
• Symbol: rpsE
• ID: 2686827
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 3121179
• End bp: 3121667
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637127529
• Product: 30S ribosomal protein S5
• Protein accession: NP_953883
• Protein GI: 39997932
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.122031
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTACAAGA TCAACCCCAA TGATTTGAAT CTTACGGACA AGGTTGTCCA TATCAGCCGT 
GTTGCCAAGG TTGTTAAAGG CGGTAGGCGG TTCAGTTTTT CAGCCTTGGT TGTCGTCGGC 
GACGGTAATG GCTGTGTCGG TTACGGACTC GGCAAGGCGA ACGAAGTCCC CGAAGCCATT 
CGCAAAGGGG TGGAGCAGGC AAAGAAGAAC CTGATCAAAG TCCCGATTGT AGAAGGCCAT 
ACCATACCGT ATGAAGTGCT TGGTCACTTT GGTGCGGGGC GCGTACTTAT CAAGCCGGCT 
TCTGCCGGTA CTGGTGTGAT CGCGGGTGGC GCTGCCAGAG CCGTCTTCGA GGCGGCAGGT 
CTGCATAACG TGCTGTCTAA GTGCCTTGGA TCTAACAACC CTCACAACGT GGTCAAGGCT 
GCTTTCAACG GTCTGGCGCA GCTGCGGAGC CCTGAAGAGA TCATGGCACG CAGAGGCGTG 
ACGGAATAG 

 

Protein sequence

MYKINPNDLN LTDKVVHISR VAKVVKGGRR FSFSALVVVG DGNGCVGYGL GKANEVPEAI 
RKGVEQAKKN LIKVPIVEGH TIPYEVLGHF GAGRVLIKPA SAGTGVIAGG AARAVFEAAG 
LHNVLSKCLG SNNPHNVVKA AFNGLAQLRS PEEIMARRGV TE