Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3815 |
Symbol | |
ID | 8139189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4386976 |
End bp | 4388175 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644871434 |
Product | TPR repeat-containing protein |
Protein accession | YP_003023592 |
Protein GI | 253702403 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGC AAAGAACAGC ATGGGACTAC ATGGACGACA TGTTCAGCAC CCTCGCCTCG CAGGAATCGC AGCGGGCGCA GCTGGCCAAC GGGGCCTTGA GTTCGGGCCT CGCCTTCTAC CAGAAGAAGG ATTACGCCCG CGCCACGAGT GAGTTGAAAC GGGCCATCTC CATGGACCCG ACCAACACCC AGGCCTACAA GTATCTGGCC GGCGCCTACC AGGCCCAGGG AAAGACCGAC GAGGCGATCA AGACCTACAA GTACTCGTTG GCGCTCGACC CGACGCAAGC CTCCGTCCAC ACCAGCCTGG GCAACGTCTA CCTGCAGCAG AAGAAGTACA ACCTGGCCGA AAGGGAGTTC AAGGACGCCG GCAAGCTCGA CCCCACCGAC ACCCTCGCCC CCTACACGCT GGGGCAGCTC TACGTGCAGA CCGAGCGCTA CGGCGAGGCG GAGGCGCAGT TCAAGAAGGT CTCCAGGATG GCCCCCACCG ACCCCAACCC CTACTATTCC CTGGGCGCCG TCTACAACAA GGAAGGGAAG TACGCCGACG CGGTGAAGCA GCTGACGCAG GCCGTGAAAC TGCGCCCCAA GATGGAGGCT GCTCATTTCG AGCTAGGCGT CGCCTATGCC GCCTTGGGCG ACACCACCAA CGCGCAGAAA GAGGTGGATA CCCTCACCAG GCTGAACGCG GCACAAGGGG CCCTGCTCCA GCTGACCATC GCCCAGCCGA AGTTCGTCGC CGCCGGAGGG GGTGAGACCG ACACCTTCAC CGCCGCCCTG GGCGCCGGCA CCGATCTCGG TTTGACGATG CTCGGCGCCG ACCCGGTGAC CACCCAGCCG ATACAGTCCA AGCAATTCAG CCTCACCTTC TACTTCGACT CCGCCATGGA CGCCGCTTCG GTGCAGGACA CGAGCAACTG GACCATCAGC AAGGCGACGG GGGGTGCGGC AGGCTACTAC AACAACCTGC AGCCGGTGGT CCCGACCGAG GCCTACATCC CGCAAAACCC TACCAGCGTC ACCTACGACC CCGAAAAAAG GAGTGCGACA GTCACCTTCC TTTTGAGCCA GAACGACACC GGCGACGCCA CCATCGACCC ATCCCACATG GTCTTCAAGT TCTCCGGCAC CGATGCCAGG GGGAAGGTGA TGGACCCCGC AGCCGACGAG TTCGACGGCG CGGCGGAAGC GCCTTTCTGA
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Protein sequence | MATQRTAWDY MDDMFSTLAS QESQRAQLAN GALSSGLAFY QKKDYARATS ELKRAISMDP TNTQAYKYLA GAYQAQGKTD EAIKTYKYSL ALDPTQASVH TSLGNVYLQQ KKYNLAEREF KDAGKLDPTD TLAPYTLGQL YVQTERYGEA EAQFKKVSRM APTDPNPYYS LGAVYNKEGK YADAVKQLTQ AVKLRPKMEA AHFELGVAYA ALGDTTNAQK EVDTLTRLNA AQGALLQLTI AQPKFVAAGG GETDTFTAAL GAGTDLGLTM LGADPVTTQP IQSKQFSLTF YFDSAMDAAS VQDTSNWTIS KATGGAAGYY NNLQPVVPTE AYIPQNPTSV TYDPEKRSAT VTFLLSQNDT GDATIDPSHM VFKFSGTDAR GKVMDPAADE FDGAAEAPF
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