| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3142 |
|---|
| Symbol | |
|---|
| ID | 8138493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3646338 |
|---|
| End bp | 3647642 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644870746 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003022927 |
|---|
| Protein GI | 253701738 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 142 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAA CAACATCTAA CAAGGGGTGG CAGGTAGTCA TGGCCGGAAC CGGAATCAAC
CTGGCGCTCG GGGTGCTGTA TGCCTGGAGT ATCTTCAAGG GGGCCATCAA GTCGTCCATC
GAAGAGGGCG GCCCCGATGC GTTCCAGTGG AGCCTCGGTT CCATCAACGA CCCGTACGCT
CTTTGCTGTC TCGCCTTTGC TTTCTCGATG ATCCTCGCAG GCAAGTGCCA GGACAAGATC
GGCCCCGCGA AGACCGCTCT CATCGGCGGC ATCCTGGTCG GCGCCGGCTT CTGCCTCATG
GGCTACTCCA ACAGCTACGC AGCCTGGGTC ACCGGCTTCG GCGTCCTGGC CGGCTCCGGC
TTCGGTTTCG GCTACTCCGC CGCCACCCCT CCGGCGCTCA AATGGTTCTC GTCCAAGAAG
ACCGGTCTCA TCGCCGGCAT CGTGGTCGCC GGTTTCGGGC TCGCGCCGGT GTACATCGCG
CCGCTCTCCA GCTACCTTTT GGGCGCGTAC GGCATCCAGC AGTCGATGTA CATCCTCGCC
GCCGGTTTCG CCGTCATCGT CTGCGGCCTC TCCTTTGTAC TGGTAAACCC GCCCAAAGGG
TTCGTTCCCG CCGAACCGGT GATCAAGGGC GAAGAAGGGA ACCCCGCCCC CGCCAAGAAG
GCCGTGCACG ACGCGACCGT CGCCGAGATG CTCCGCTCTC CCAAGTTCTA CATGCTGTGG
ACCACCTTCT TCATCGGTGC GGGCGCAGGA CTTATGGTGA TCGGCTCCGT GGCGGGCCTC
GCCAAGAAGA GCATGGGCCC CATGGCATTC GTCGCCGTGG CCATCATGGC GATCGGCAAC
GCCGCCGGCC GCGTCGTTGC CGGCGTTCTT TCCGACAAGA TCGGCCGCCG CGCCACCCTG
ACCATCATGC TCAGCTTCCA GGCGGTGCTG ATGTTCGCTG CCGTCCCCGT CGTCGGCTCC
GGTTCCGCGA CCCTGCTGGT GCTCCTGGCC TCCCTAATCG GCTTCAACTA CGGCTCCAAC
CTGACCCTCT TCCCCTCCTT CGCCAAGGAC TACTGGGGCT TCAAAAACTA CGGCCTCAAC
TACGGCGTAC TGTTCAGCGC CTGGGGCGTA GGCGGCATGG TGATGGGGCG TGTCTCCGAG
ATGATGAACG CGCAGCCCGG CGGTCTGAAC AAGTCCTTCA TCCTGGCGGG TTCCTGCCTT
GCCATGGGCA CCATCGTCAC CTTCTTCCTG CGTGAGAAGA AGGCGGTCGC GGTCGAGGCT
GCCGAGGTGG TCGGAGAGAA GGTCGCGGTC AAGGTTTCCG CCTAG
|
|---|
| Protein sequence | MSKTTSNKGW QVVMAGTGIN LALGVLYAWS IFKGAIKSSI EEGGPDAFQW SLGSINDPYA
LCCLAFAFSM ILAGKCQDKI GPAKTALIGG ILVGAGFCLM GYSNSYAAWV TGFGVLAGSG
FGFGYSAATP PALKWFSSKK TGLIAGIVVA GFGLAPVYIA PLSSYLLGAY GIQQSMYILA
AGFAVIVCGL SFVLVNPPKG FVPAEPVIKG EEGNPAPAKK AVHDATVAEM LRSPKFYMLW
TTFFIGAGAG LMVIGSVAGL AKKSMGPMAF VAVAIMAIGN AAGRVVAGVL SDKIGRRATL
TIMLSFQAVL MFAAVPVVGS GSATLLVLLA SLIGFNYGSN LTLFPSFAKD YWGFKNYGLN
YGVLFSAWGV GGMVMGRVSE MMNAQPGGLN KSFILAGSCL AMGTIVTFFL REKKAVAVEA
AEVVGEKVAV KVSA
|
|---|
| |