Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1679 |
Symbol | |
ID | 5670081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2007814 |
End bp | 2010246 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641240597 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001506023 |
Protein GI | 158313515 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.238517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.622567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCAC CGGCCACCGA CCGGCGCCAG GTGGATCTGG TGATAGGCGG GATGACCTGC GCATCCTGCG CGGCTCGTGT CGAGCGGAAG CTGAACAAGC TGGACGGCGT CACCGCCACG GTCAACTACG CCACGGAGAA GGCCAAGGTC AGCTTCCCGG CCGGCCTGCC GGCCGATCGG CTGGTCGCCC AAGTGGAGGC CGCCGGCTAC ACGGCGACGA TCCCGCTGCC CGCGCCGTCC CGACCGGCCG CGCGACCCGG CGCCCGTGAC GCGGCGAACC GCCCCGCCTC GGACCACGCC ACCGGAGACC GGGCCGACGA CAGCACCGCC GTGGACAGCA CCGCCGCCGG CAGTACCGCC GGCGGTAGCG CGGCTGACGA GAGTCTCCCC GCCGACGGTC GGGTGCGCGC CCTGCGCGAC CGGCTGCGTG TGGTCGTCGG GTTGACCGTC CCGGTGGTGC TCCTGGCGAT GGTGCCGGCC CTGCAGTTCG ACTCCTGGCA GTGGCTGTCG CTGACGCTCG CCGCGCCCGT CGTAGTGTGG GGCGGCTGGC CGATCCACCG GGTGGCGTGG ACGAACCTGC GCCACGGCTC GACGACGATG GACACGCTCG TCTCGATCGG CACCCTCGCC GCCTTCGGAT GGTCGCTGTA CGCGCTGTTC GTCGGCGACG CCGGCGAGCC CGGGATGACC CACGACTTCA GTGTCACCGT CACTCGCGGT GCCGGGGCGG ACAGCATCTA CCTGGAGGTG GCGGCCGGCG TCACCGCGTT CATCCTCACC GGCCGGTACC TGGAGGCCAG AGCCAGGCGC AGCGCCGGCT CCGCGCTACG CGCGCTGCTC GCCATGGGGG CGCGTGACGT CGCCGTTCTC CGCGACGGCC GGGAGGAACG AGTCGATGTC GATCAGCTCG GCGTCGGTGA CCTCTTCGTC GTCCGTCCGG GGGAGAAAAT CGCCACGGAC GGGGTGGTCG TAGCGGGCGC GTCAGCCGTC GACGCGTCAA TGCTCACCGG AGAGTCCGTC CCGGTGGAGG TCCGTCCCGG CGACGACGTC ACCGGTGCCA CCCTGAACGC GGGGGGCCGG CTCGTCGTCC GCGCCACGCG GGTCGGCGCG GACACCCAGC TCGCGAGGAT CGGACATCTC GTCGAGGAGG CGCAGAGCGG CAAGGCGCCG GTGCAGCGGC TCGCCGACCG GATCGCGGCC GTCTTCGTGC CGGTCGTGCT CGCGCTCTCG GCGCTCACCT TCGGCTACTG GGCGGGCCGG GGGGACGGCC TGGCCGCCGC GTTCACCGCG GCCGTCGCGG TGCTGATCAT CGCGTGCCCG TGCGCGCTCG GCCTCGCCAC GCCGACCGCC CTGCTGGTCG GCACGGGACG CGGCGCCCAG CTCGGCCTGC TCATCCGCGG ACCCGAGGTG CTGGAGTCGA CCCGCCGGGT CGACACGATC GTCCTGGACA AGACCGGCAC GGTGACGACC GGCGAGATGA CTCTCCTGGA CGTCGCCACC GCCGCCGGCG AGGACCGGGA CGAGGTACTG CGGCTCGCGG GTGCCCTGGA GAGCGCCTCC GAGCACCCGG TGGGCCGCGC GATCAGCCGG GCCGCCGCCG CGGCGGCGGC GGAGCGGTCG TCCGCGGAGC TGCCCGGCGT CACCGAGTTC GCCACCAAGG AGGGCCTCGG GGTGCGCGGA CTGGTCGCCG GCCGCGCCGT GCTGGTCGGC CGTCCGAGGC TGCTGACGGG GTGCTCGCAG CCGCTGCCCG CGAACCTCGC GGAGATCGCC CGCACGGCCG AGGCCGCCGG CCGCACCGCC GTCGCGGTCT CCTGGGACGG GCGCGCCCGC GGCGTGCTCA CCGTCGCCGA CGCGGTCCGG CCGACCTCGG CCGCCGCGAT CCGCGAGCTG CGGGGACTAG GCCTGCGCCC GATTCTGCTA ACCGGCGACA ACGCCTCCGT CGCGGCCACC GTCGCGGCGG AGGTGGGGAT CGCCCCGGAG GACGTGGTCG CCGAAGTCCT GCCAGCGGAG AAGACCGAGG TCGTGCGCCG GCTGCAGGCC GGCAACCGGG TGGTGGCGAT GGTCGGCGAC GGGGTGAACG ACGCCGCCGC GCTGGCCCAG GCGGACCTCG GTCTGGTGAT GGGAACCGGC ACGGACGTCG CGATCGAGTC CGGTGACCTG ACTCTCGTCC GGGCCGATCT GCTCGCGGCC GTGGACGCGA TCCGCCTGGC CCGGCGGACA CTCGCCACCA TCCAGGGCAA CCTGTTCTGG GCCTTCGCCT ACAACGCCGC CGCGCTGCCG CTGGCCGCGG CCGGCCTGCT CAACCCGATG CTCGCCGGGG CGGCGATGGC GGCCAGCTCG CTGTTCGTCG TCGGCAACAG CCTGCGCCTG CGTGGTTTCA CCCCGCGGCC GGACCCGGCA CCCGGCCCGG ACCCGGCACC CGGCTCAGAC TGA
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Protein sequence | MSPPATDRRQ VDLVIGGMTC ASCAARVERK LNKLDGVTAT VNYATEKAKV SFPAGLPADR LVAQVEAAGY TATIPLPAPS RPAARPGARD AANRPASDHA TGDRADDSTA VDSTAAGSTA GGSAADESLP ADGRVRALRD RLRVVVGLTV PVVLLAMVPA LQFDSWQWLS LTLAAPVVVW GGWPIHRVAW TNLRHGSTTM DTLVSIGTLA AFGWSLYALF VGDAGEPGMT HDFSVTVTRG AGADSIYLEV AAGVTAFILT GRYLEARARR SAGSALRALL AMGARDVAVL RDGREERVDV DQLGVGDLFV VRPGEKIATD GVVVAGASAV DASMLTGESV PVEVRPGDDV TGATLNAGGR LVVRATRVGA DTQLARIGHL VEEAQSGKAP VQRLADRIAA VFVPVVLALS ALTFGYWAGR GDGLAAAFTA AVAVLIIACP CALGLATPTA LLVGTGRGAQ LGLLIRGPEV LESTRRVDTI VLDKTGTVTT GEMTLLDVAT AAGEDRDEVL RLAGALESAS EHPVGRAISR AAAAAAAERS SAELPGVTEF ATKEGLGVRG LVAGRAVLVG RPRLLTGCSQ PLPANLAEIA RTAEAAGRTA VAVSWDGRAR GVLTVADAVR PTSAAAIREL RGLGLRPILL TGDNASVAAT VAAEVGIAPE DVVAEVLPAE KTEVVRRLQA GNRVVAMVGD GVNDAAALAQ ADLGLVMGTG TDVAIESGDL TLVRADLLAA VDAIRLARRT LATIQGNLFW AFAYNAAALP LAAAGLLNPM LAGAAMAASS LFVVGNSLRL RGFTPRPDPA PGPDPAPGSD
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