| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0229 |
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| Symbol | |
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| ID | 5668654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 279463 |
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| End bp | 282075 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641239158 |
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| Product | ATPase |
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| Protein accession | YP_001504602 |
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| Protein GI | 158312094 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.388652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTG ACCGTCTCAC CGCCCGCTCG CAGGAGGCTC TGTCCTCCGC GATCAGCCGT
GCCACCGGCG ACGGATCGCC GCTCGTCGAC CCGCTGCACC TGCTGACCGC CCTGCTCGAG
GCGCCCGACG GTGTCGGTGC CGCCCTGCTG GAGGCCGTCG GCACCCCGGC GGCGGACATC
CGCTCCCGGG CGGAGGCCGC GGTGGGCCGG CTCCCCCGCG CCGCCGGGGC CAACGTGGCG
CCGCCGCAAC TGTCCCGGCA GCTCGTCGCC GTCCTGAACA ACGCCGAGCG CCAGGCCGCC
CGGCTCGGCG ATGAGTACAC CTCGGTCGAG CACCTGGTCG TGGCGCTCGC GGAGGAGGGC
GGGGAGGCGT CCCGCATCCT CGCCGAGGCG GGCGCGACCC CGGACGCCCT GCGCGGCGCG
TTCGACCGCG TCCGCGGCGG CGCCCGCCGC GTCACCAGCC GGGATCCGGA GGGGGCCTAC
CGGGCGCTCG AGAAGTACTC CATCGACCTC ACCGCGCGGG CCCGCGACGG CAAGCTCGAC
CCGGTGATCG GCCGCGACAC CGAGATCCGC CGGGTCGTGC AGGTTCTCTC CCGGCGCACG
AAGAACAACC CGGTCCTGAT CGGCGAGCCC GGCGTCGGCA AGACGGCGAT CGTCGAGGGG
CTCGCGCTGC GGGTGGCCGC GGGTGACGTC CCGGAGTCGC TGCGCGGGCG GCGCATCGTC
TCGCTCGACC TCGGCTCGAT GGTCGCCGGC TCCAAGCTGC GCGGCGAGTT CGAGGAACGG
CTGACCTCGG TGCTCACCGA GATCCGCGAG GCCGAGGGCC AGATCATCAC CTTCATCGAC
GAGCTGCACA CCGTCGTCGG CGCCGGCGCG GCCGAGGGCG CGATGGACGC CGGCAACATG
CTCAAGCCGA TGCTCGCCCG CGGTGAGCTG CGCATGATCG GCGCGACGAC GCTGGACGAG
TACCGCACCC GCATCGAGAA GGACCCGGCG CTGGAGCGCC GCTTCCAGCC CGTGATGGTC
GGGGAGCCGT CCGTGGAGGA CACGATCGGC ATCCTGCGCG GGCTCAAGGA GCGTTACGAG
GTCCACCACG GGGTGCGGAT CACCGACTCG GCGCTGGTGG CCGCGGCCAC CCTGTCCGAC
CGGTACGTCA CCGCCCGGTT CCTCCCCGAC AAGGCGATCG ACCTGATGGA TGAGGCGGCG
TCCCGGCTAC GGATGGAGAT CGACAGCCGG CCGGTCGCCG TCGACGAGCT CGAGCGGGCC
GTGCGCCGTC TCGAGATCGA GGACATGGCG CTGTCGAAGG AGAACGACGA CGCGTCCCGG
GAACGGCGCG ACCGGCTGCA GCGCGAGCTG GCGGAGAAGC GCGAGGAGCT CTCCGCGCTG
ACCGCGCGGT GGCAGCGGGA GAAGAACTCC ATCTCCGAGG TCCAGAAGAT CAAGGAGGAG
CTGGAGAACG CCCGCCGCGC CGCCGAGATG GCCGAGCGCG ACCTCGACCT CGCCAAGGCC
GGTGAGCTGC GGTACGGCAC GATCCCGACG CTGGAGAAGC GGCTCGCCGA GGCGACCGGC
GCGCTCGCCG GATCGGACTC GCCCGGCGGG GCGATGCTCA GCGAGGAGGT CGGTCCCGAC
GACGTCGCCG AGGTCGTCGC CTCGTGGACG GGCATCCCCG CCGGCCGCAT GCTCGAGGGC
GAGACGAGCA AGCTCCTGCG CATGGAGACG GAGCTGCACC GTCGCGTGAT CGGGCAGGAC
GAGGCCGTGC GCACCGTGGC GGACGCCGTC CGCCGCGCGC GGGCCGGCAT CGCCGACCCG
GACCGGCCGA CCGGGTCGTT CCTCTTCCTC GGGCCGACGG GTGTGGGCAA GACGGAGCTG
GCCAAGGCGC TCGCCGACTT CCTGTTCGAC GACGAGCGGG CGGTCGTGCG CATCGACATG
AGCGAGTACG CCGAGAAGCA CTCGGTGGCG CGGTTGATCG GCGCGCCTCC CGGCTACGTC
GGCTTCGAGT CCGGCGGCCA GCTCACCGAG GCGATCCGGC GCCGCCCGTA CAGCGTGATC
CTGCTCGACG AGGTCGAGAA GGCGCACCCG GACGTCTTCG ACGTGCTGCT CGCCGTACTC
GACGACGGCC GGCTGACCGA CGGCCAGGGC CGCACGGTCG ACTTCCGGAA CACCATCCTG
ATCCTGACCT CGAACCTGGG GTCGGTCTAC ATCGCCGACC CGACCCTGCC CCCGCAGGTC
CGCCACGATT CGGTGATGGT CGCCGTGCGC GACGCCTTCA AGCCGGAGTT CCTGAACCGG
CTCGACGACG TGCTGGTCTT CGAGCAGCTC GGCCGGGACG ATCTGACGAA GATCGTCGAC
ATCCAGATCG ACCGGCTGCG CAGGCGGCTG GCCGACCGCC GGATCTCCCT CGAGGTGACC
GACGCCGCCA AGGTCTGGCT CGCGGACGCC GGCTACGACC CGGTGTACGG GGCGCGGCCG
CTGCGCCGCC TGGTGCAGAC CTCGATCGGC GACCAGCTCG CCCGCGAGCT GCTGGCCGGC
CAGATCAGGG ACGGCGACGG GGTCGTGGTC GACGTGGACG GGCAGCGCTC GGCGCTGAGC
GTCCACTCCG CGGCCCGCGC GCAGGCCATC TGA
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| Protein sequence | MNADRLTARS QEALSSAISR ATGDGSPLVD PLHLLTALLE APDGVGAALL EAVGTPAADI
RSRAEAAVGR LPRAAGANVA PPQLSRQLVA VLNNAERQAA RLGDEYTSVE HLVVALAEEG
GEASRILAEA GATPDALRGA FDRVRGGARR VTSRDPEGAY RALEKYSIDL TARARDGKLD
PVIGRDTEIR RVVQVLSRRT KNNPVLIGEP GVGKTAIVEG LALRVAAGDV PESLRGRRIV
SLDLGSMVAG SKLRGEFEER LTSVLTEIRE AEGQIITFID ELHTVVGAGA AEGAMDAGNM
LKPMLARGEL RMIGATTLDE YRTRIEKDPA LERRFQPVMV GEPSVEDTIG ILRGLKERYE
VHHGVRITDS ALVAAATLSD RYVTARFLPD KAIDLMDEAA SRLRMEIDSR PVAVDELERA
VRRLEIEDMA LSKENDDASR ERRDRLQREL AEKREELSAL TARWQREKNS ISEVQKIKEE
LENARRAAEM AERDLDLAKA GELRYGTIPT LEKRLAEATG ALAGSDSPGG AMLSEEVGPD
DVAEVVASWT GIPAGRMLEG ETSKLLRMET ELHRRVIGQD EAVRTVADAV RRARAGIADP
DRPTGSFLFL GPTGVGKTEL AKALADFLFD DERAVVRIDM SEYAEKHSVA RLIGAPPGYV
GFESGGQLTE AIRRRPYSVI LLDEVEKAHP DVFDVLLAVL DDGRLTDGQG RTVDFRNTIL
ILTSNLGSVY IADPTLPPQV RHDSVMVAVR DAFKPEFLNR LDDVLVFEQL GRDDLTKIVD
IQIDRLRRRL ADRRISLEVT DAAKVWLADA GYDPVYGARP LRRLVQTSIG DQLARELLAG
QIRDGDGVVV DVDGQRSALS VHSAARAQAI
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