Gene Francci3_4470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4470 
Symbol 
ID3907446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5341256 
End bp5341702 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content66% 
IMG OID637881802 
Productresponse regulator receiver protein 
Protein accessionYP_483545 
Protein GI86743145 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA GTGTCCGTAC GGACCCGTTC GACGTACTGC TGGTTGAGGA CGACCCGGGG 
GATGTCCTCA TGACCCGCGA AGCGTTCGCG GATGATCGGA TCAACGGCAG GCTGCATGTC
GTGAACGACG GCATCCAAGC CATGGCGTTC CTTCGCCGGG AGGAGCCCTT CACACAGGCC
CCGGCGGCCG ACCTGATCCT GCTGGACCTC AACCTGCCGC GCCGGGGCGG CATCGAGGTG
CTGGCCGAGG TCAAGGCCGA CACCGACCTG CGACGCATCC CCGTCGTGGT GCTCTCCACC
TCGGGCGCTG CCGAGGACAT CCTGCGCAGC TACAACCTGC ACGCCAACGC CTACGTGACG
AAGGCGGTCG ATTTCGACCG GTTCGTCGAC GACGTGCGGT TCATCGACGA CTTCTTCATC
ACCGTGGTTC GGTTGCCCGG GCGCTGA
 
Protein sequence
MTASVRTDPF DVLLVEDDPG DVLMTREAFA DDRINGRLHV VNDGIQAMAF LRREEPFTQA 
PAADLILLDL NLPRRGGIEV LAEVKADTDL RRIPVVVLST SGAAEDILRS YNLHANAYVT
KAVDFDRFVD DVRFIDDFFI TVVRLPGR