Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4110 |
Symbol | |
ID | 3907074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4915559 |
End bp | 4916269 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637881438 |
Product | integrase |
Protein accession | YP_483187 |
Protein GI | 86742787 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCGAC GTCGTGCCTG TCCACCGGTT CCGGTGTCGG AGTTCGCGGG GTTCCGGTTC CCACCTGAGG TGATTGTCCT CGCTGTCCGC TGGTACCTGC GGTACGTACT GTCCTACCGG GACGTCGAGG AGCTGCTCGC TGAACGCGGC CTCGAGGTCG ACCACGTCAC GGTCTATCGG TGGGTGCAGC GCTTCACGCC CTTGCTGGTG GAGGCGGCCC GGCCGTGCCG GCACCGTCCT GGCGGAAGGT GGTTCGTCGA CGAGACCTAC GTCAAGGTCT CCGGCCGCTG GACCTACGTG TACCGGGCGG TCGACCAATA CGGGCAGGTC ATCGACGTCC TCGCCAGCAC ACGGCGCGAC CAGGCAACCG CCCGGCGATT CTTCGTTCGA GCGCTGACGT ATGGGCGCCG CCCGGACGAG GTCACCACCG ACAAGGCCGC GGTCTACCCG CGGGTCCTCG ACGAGCTGGT ACCCGAGGCC TGCCACATCG ACGCCGCCCG GGAGAACAAC CGGATCGAAG CCGACCACGG CCGGTTGACA GCACGGCTCC GACCGATGCG CGGACTGAAA CGACTGCGGT CCGTCCAGAC GATCAGCGCC GGCCACGCGC TGGTCCAGAA CATCCGCCGC GGCCACTACG AACTCGGGAT CGACACCAGG CCGCAGATAC GGCTGGCAGC CGCGTTCACC GAACTCGCCG CCGCTGTCTG A
|
Protein sequence | MRRRRACPPV PVSEFAGFRF PPEVIVLAVR WYLRYVLSYR DVEELLAERG LEVDHVTVYR WVQRFTPLLV EAARPCRHRP GGRWFVDETY VKVSGRWTYV YRAVDQYGQV IDVLASTRRD QATARRFFVR ALTYGRRPDE VTTDKAAVYP RVLDELVPEA CHIDAARENN RIEADHGRLT ARLRPMRGLK RLRSVQTISA GHALVQNIRR GHYELGIDTR PQIRLAAAFT ELAAAV
|
| |