Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0094 |
Symbol | |
ID | 3905138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 115384 |
End bp | 117018 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877424 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_479217 |
Protein GI | 86738817 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.971406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAGACG TCGCACCCCG CTTCGGCGCC ACCCCCGGAT GGGAATCAGA CCTCTCCGAC GAGCCGGGGC CGCGTGACGC CTGCGGTGTG TTCGGGGTGT GGGCGCCCGG TGAGGACGTG GCGAACCTGG CCTACTACGG TCTGTACGCG CTGCAGCACC GCGGGCAGGA GGCTGCCGGC ATCGCGGTCG GGGACGGTCG GACCGTGGTG GTCTTCAAGG AACTGGGGCT TGTCGCTCAG GTCTTCGACG AGGTCACCCT GTCCAGCCTG AGCGGCCATG TGGCGGTCGG TCACACCCGG TACTCGACGA CGGGCTCCTC CACCTGGGAG AACGCCCAGC CGTCGTACCG CACCGCCCGC TTCGGCGGCC CCATCGCGCT CGGGCACAAC GGCAACCTCA CCAACATCGT CGAGCTCGCG CGGACGCTCG GCGCGGAGCG GGACCGCCTG CGGGCGACCA CCGACTCGGA CCTCATCACC GCCATGCTCG CCGACCATCC CGGCCCGACC CTCGTCGACG CGGCGATGGA CGTGCTGCCC CGCCTGACCG GGGCCTTCTC GCTGGTCTTC TCGGACGCCT CGACGCTGTA TGCCGCCCGG GACGCGCACG GGATCCACCC GCTCGTGCTC GGCCGGCTCG ACGGCCATCC CGACGGCGCG TGGATCATCG CCAGCGAGAC GGCCGCCCTC GACATCGTCG GCGCCACCCT CGTACGGGAG ATCGTTCCCG GCGAGCTGGT CGTCATCGAC GCCGAGGGGG TGCGTTCGCG CACGTTCGCC CGGCCCGATC CGCACGGCTG CCTGTTCGAG TACGTCTATC TCGCCCGCCC GGACACGTCG ATCGCCGGAC GTTCCGTGCA CGCCACCCGG GTCGATGTTG GCCGGCAGCT GGCCCGCGAG GCGCCGGTGG AGGCCGACCT GGTCATCCCC GTGCCGCAGT CCGGGGTACC CGCCGCGGTC GGCTACGCGG AGGAGTCGGG TATCCCGTTC GGTGAGGGCC TGGTCAAGAA CTCCTACGTC GGGCGCACCT TCATCCAGCC CTCGCAGACG ATTCGGCAGC GCGGGATCCG GCTCAAGCTG AACCCCCTGC GGGATGTGAT CGAGGGGCGT CGCCTCGTCG TGGTGGACGA CTCGATCGTC CGCGGCAACA CGCAGCGCGC GCTGGTGCGC ATGCTGCGGG AGGCCGGCGC CGCCGAGGTC CACATCCGGA TCTCCTCGCC GCCGGTACGG TGGCCCTGCT TCTACGGCAT CGACTTCGCG ACCCGCGCCG AGCTGATCGC CAGTGAGGCG GGCATCGAGG AGATCAGAGC CTCTCTCGGG GCCGACTCGC TGGCCTACGT CTCGTTGGAG GGCCTCGTCG AGGCCTCCCG CCAACCGGCC GGCACGCTCT GCCGGGCCTG CTTCGACGGC GTGTACCCGG TTCCGCTGAA CGATTCCGAC AAGCTCGGCA AGCATCGGCT GGAGGCGACG GGCGGCGCGG AGACCACCGA GGACATGATC GCCGAGGCGT TGCGGCGCGG CGTGACGCTG GGCATGAACG GTGCCGATCC CTCCCCGGAC AACCACGACG CCGAGCCTGA GCCCGAGCCC GATCTTGAGT CCGAGCCCGA GCCGGCCGGG GTGAGGCCCG CATGA
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Protein sequence | MPDVAPRFGA TPGWESDLSD EPGPRDACGV FGVWAPGEDV ANLAYYGLYA LQHRGQEAAG IAVGDGRTVV VFKELGLVAQ VFDEVTLSSL SGHVAVGHTR YSTTGSSTWE NAQPSYRTAR FGGPIALGHN GNLTNIVELA RTLGAERDRL RATTDSDLIT AMLADHPGPT LVDAAMDVLP RLTGAFSLVF SDASTLYAAR DAHGIHPLVL GRLDGHPDGA WIIASETAAL DIVGATLVRE IVPGELVVID AEGVRSRTFA RPDPHGCLFE YVYLARPDTS IAGRSVHATR VDVGRQLARE APVEADLVIP VPQSGVPAAV GYAEESGIPF GEGLVKNSYV GRTFIQPSQT IRQRGIRLKL NPLRDVIEGR RLVVVDDSIV RGNTQRALVR MLREAGAAEV HIRISSPPVR WPCFYGIDFA TRAELIASEA GIEEIRASLG ADSLAYVSLE GLVEASRQPA GTLCRACFDG VYPVPLNDSD KLGKHRLEAT GGAETTEDMI AEALRRGVTL GMNGADPSPD NHDAEPEPEP DLESEPEPAG VRPA
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