Gene Francci3_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0093 
Symbol 
ID3905137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp114314 
End bp115126 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content75% 
IMG OID637877423 
Producthypothetical protein 
Protein accessionYP_479216 
Protein GI86738816 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACCCC GCGGACGCCG CCAGGATCCC AGGGCGACCG GTACCGAGCT GGCCGCGACG 
TTGGCGGACC AGTGGCAGCG GATCGTCGAT GCGGTGAGTG TCCTGCCCGA CGGGGCCCTC
GGGGTGCCGA GTCCGCTGCC CGGCTGGACG GTCGGCGACC TCGTCCTGCA CGTCTCCCGC
TCCGCGTCCG CGCTCACCGA GGCCCTGGCC CCCGCGGTCC CGGCGTCCCG GCGCACGACG
GATCTCGTCA CGGCGAGGGA TCTCGTCACC GCGAGCGGCT ACCTGACGGG CGCCGGAACC
CGGACGGAGG CCGTCGCGGA CACCGCCCGC TCGCTGGCGG CGAACCGTGG GCCGGCCGAG
ATCAGAGGCC GGCTGGCCGG CGAGGTGTCG GCCGCGGTGG CCGCCATGGC CGCGGTGACT
CAGGAAGCGG TGGTCCCGAC GCCGGGCGGC CCAATGCGAC TGGCGGAGTT CCTGCGCACC
CGAGCGGTCG AGGCGGTGGT GCACGGCCTC GATCTAGGCG TCACGCCGGT CCGGGATGCG
CTCAGGGCGG CGACGAAGGT GTTCGCGGAG ATGTTCGCCG AGCGGGCACC CGGACGCTCG
GTGGAACTGC GGGTGCCGCC GTTCACAGCC GTGCAGATCG TCGAGGGTCC ACGCCATACC
CGGGGCACAC CGCCGAATGT CGTCGAGGCC GAACCCGTCG CCTTCGTCCT GCTGTGCGCG
GGCCGCCTGC CGTGGGCCGA GGCGGTGGCC GACGGCCGGG TCGCGGCCAG CGGCGAGCGC
GCCGACCTCA GTTCCTACCT GCCCCTCCTG TAG
 
Protein sequence
MPPRGRRQDP RATGTELAAT LADQWQRIVD AVSVLPDGAL GVPSPLPGWT VGDLVLHVSR 
SASALTEALA PAVPASRRTT DLVTARDLVT ASGYLTGAGT RTEAVADTAR SLAANRGPAE
IRGRLAGEVS AAVAAMAAVT QEAVVPTPGG PMRLAEFLRT RAVEAVVHGL DLGVTPVRDA
LRAATKVFAE MFAERAPGRS VELRVPPFTA VQIVEGPRHT RGTPPNVVEA EPVAFVLLCA
GRLPWAEAVA DGRVAASGER ADLSSYLPLL