| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0088 |
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| Symbol | |
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| ID | 3905132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 107420 |
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| End bp | 108103 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637877418 |
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| Product | 2',5' RNA ligase |
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| Protein accession | YP_479211 |
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| Protein GI | 86738811 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.531948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CTGGCAACCA GACTGTTCGT GGCGGCCGTC CCACCCCCCG AGGTCGCCGA GGCGCTGCTC
GCGGCCGTGC GCAGGACGCG CGCCGCGGCG GCGGATCTGC GCTGGACCAC GCCGGACCAG
TGGCACGTCA CGTTCGCCTT CCTCGGGCCG GTGCCGGACG ACCGGCGCGC CGAGCTCGGC
GTGAGACTGG CGCGGGTGGC ACGCCGGCAC GGCCCGTTCG CCGTCGAGAC GGTCGGCGGC
GGACGGTTCG GCGATCGGGT GCTGTGGACC GCGGTGCGGC AGCCACCGCC GGTGACCGCG
GACGCATCCG TCGACGGCAT TGCCGCGGCC GCCGCCGCGG CCGCCGGTGA CGTGGCAGGC
TCGCGAGCCA GCCCACGCCT GACGGCGCTG GCGGTCGGGG TCCGGCGGGC CGCCGAGCGT
GCCGGGGCGG CCCGCCGGAA CACCCGTCCG TTGCGCGCAC ATCTGACACT CGCCCGGGTG
CCGAACGGAC GCGGGCGAGC ACTGGAACCG CTCGTCGAGC TGTTGCGTGC CGATGTCCCA
CCGCTGCCCT GGAGCGTCGA GCGGCTCATC CTGATGAGCA GCTCGGGCGG CGGCGAGTCC
GGATCATCCC CCACCTACCG GGCGGAGACG GTCTGGGACC TCGTCGGCGG TCAACCGTCG
GTCGAGGGAT CCGCCGGGCG GTAG
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| Protein sequence | MATRLFVAAV PPPEVAEALL AAVRRTRAAA ADLRWTTPDQ WHVTFAFLGP VPDDRRAELG
VRLARVARRH GPFAVETVGG GRFGDRVLWT AVRQPPPVTA DASVDGIAAA AAAAAGDVAG
SRASPRLTAL AVGVRRAAER AGAARRNTRP LRAHLTLARV PNGRGRALEP LVELLRADVP
PLPWSVERLI LMSSSGGGES GSSPTYRAET VWDLVGGQPS VEGSAGR
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