Gene Francci3_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0086 
Symbol 
ID3905130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp105749 
End bp106180 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content73% 
IMG OID637877416 
ProductMarR family transcriptional regulator 
Protein accessionYP_479209 
Protein GI86738809 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACCG AGACGGCACG TGAGGCCGAA CTCGCGTCCG CGCTGCGCCT GTCGGTGATG 
CGGCTTTCCC GGCGCATGCG CCAGGAGCGG TCGAGCCGGC TCACCCCCAC GCAGACCTCC
GCGCTTGCCA CGCTGGAGCG GCACGGCCCC ATGACGCTCG GGGAGATCGC CGCCCACGAG
CGCGTCCAGC CGCCGTCGAT GACCCGGGTG ATCGCGCATC TGGCCGTCAC CGGGCTCGTC
GAGCGCCGGC CGCATCCCAC CGACGGCCGT CAGGTGATCG CCGAGGTGAC CGAGGCGGGT
CGAGCCCTGC TCGAGGACGA CCGTCGGCGC CGGGACGAAT GGCTGACCGA TCGGCTGGCC
GAGCTCTCAC TCGAGGAGAT CGCCGCGCTG AACCGCGCCG CACCGATCCT GGACGCGCTT
GCCGGCTCGT AG
 
Protein sequence
METETAREAE LASALRLSVM RLSRRMRQER SSRLTPTQTS ALATLERHGP MTLGEIAAHE 
RVQPPSMTRV IAHLAVTGLV ERRPHPTDGR QVIAEVTEAG RALLEDDRRR RDEWLTDRLA
ELSLEEIAAL NRAAPILDAL AGS