| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0067 |
|---|
| Symbol | |
|---|
| ID | 3905402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 83126 |
|---|
| End bp | 84502 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637877397 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_479190 |
|---|
| Protein GI | 86738790 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGATGG TCCCATCGCG CGCCATAATC GAACACATGT TCGGTAAAGA TCTGGAGACG
GTTCCCCTCC CTGCCCTCGA GACGGAACTC TGCAGCTGGG CGGGTCGACT GGCTGCCGCC
ACCTGCCGTT GGCTGATTCT GCTCGCTGCC TTCGATCGCC GCAAAGGTTG GTCCGCCAGC
GGCATGCCGA CCTGCGCGCA CTGGTTGTCC TGGCGGTGCG GACTCGGACT TCGCGCCAGC
TACGACTACC TTCGAGTCGC CCGAGCACTA GAACTCCTTC CCCTCATTCG CGAGTCCTTC
TCCAAAGGAG AGATCTCCTA TTCAAAGGTT CGGGCTATAA CACGTGTCGC CGAGCCGGAG
ACGGAAGCAA GGTGGGTTGA GCAGGCCGCA CAGTGCACAG CGCAGAAGCT CGAGAGACTC
GTGTCCTTGC ATGCCAAAAT CAATCATGAT CAAAAAGATG AGAACGGGGG GCGCGACGAA
GATGGCCCGA ACAATACGCG GTGCTCTTGG CGGTGGAACG AAGATGGAAC ATTTTCACTG
TCCGTCCGCC TCGATCCAGC CCGTGGTGCG ATCATTGAGA GCGCTCTCGT CATGGCCATG
TCAAGCCTGC ACGACTCCCG AGACTCTAAC CGGGAAGATT CTTCCACGAC ATCCGATGCC
GAGGGCTCGA TCAATGACAC CTCGATAACA CACGCAGGTC CTGAGATGAA AGCCGATGCC
TTGACGGCTA TGTCCGAATC TTTCCTCTCC ACCGGCGCTC CCACGCTGAT GAGCTCCACA
TCTCACACGA TAAATGTACA CATAGATATT GATACACTTA TCGGTTCAAG CCGAGAGAAC
CATGGATCCC CCCTCCAGCG ACATGAAGGG AATGGACTGA ATACCCGAAG GTGTGATGTG
AAGGACCATA TCCCCGTTCT ACCGAACGTC GTTCGAAGAC TGTCCTGCGA CAGCCTCCTT
CGGACACTTA TTATAGACTC CAAGGGAAAC CCTCTCATGC TGGGTCGCAC CCGCCGAAAC
CCAACCACGA GATTGCGGCT AGCAATTTAT GCACGCGACC GAGGGGTATG CCAGTATCCG
GGCTGCCATC ATACCCGCTG GCTCCAGGTA CATCATATGA AGGAATGGGC ATCCGGAGGC
GGAAATACAG ATCTTGATAA TCTCGTTCTG ATCTGCTCCC TTCATCATCG GACTATTCAT
GAAAGGCGGA TTGTTCTGCA GCGCGGACGC GACGGTTCGA TTGTCGCCCG CCATCGTGAC
GGAACGCTGA TGCAGCAGGC GCCACGGCTG CATCTGGGTC CGGATCTGTT GGAGCTCCTC
AGCGATAACA CCTCAGCCGC GCCAGCTGAG ACCGTCCCGA CAAGACGAGT AGCCTGA
|
|---|
| Protein sequence | MTMVPSRAII EHMFGKDLET VPLPALETEL CSWAGRLAAA TCRWLILLAA FDRRKGWSAS
GMPTCAHWLS WRCGLGLRAS YDYLRVARAL ELLPLIRESF SKGEISYSKV RAITRVAEPE
TEARWVEQAA QCTAQKLERL VSLHAKINHD QKDENGGRDE DGPNNTRCSW RWNEDGTFSL
SVRLDPARGA IIESALVMAM SSLHDSRDSN REDSSTTSDA EGSINDTSIT HAGPEMKADA
LTAMSESFLS TGAPTLMSST SHTINVHIDI DTLIGSSREN HGSPLQRHEG NGLNTRRCDV
KDHIPVLPNV VRRLSCDSLL RTLIIDSKGN PLMLGRTRRN PTTRLRLAIY ARDRGVCQYP
GCHHTRWLQV HHMKEWASGG GNTDLDNLVL ICSLHHRTIH ERRIVLQRGR DGSIVARHRD
GTLMQQAPRL HLGPDLLELL SDNTSAAPAE TVPTRRVA
|
|---|
| |