Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0059 |
Symbol | |
ID | 3905394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 74865 |
End bp | 75776 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877389 |
Product | hypothetical protein |
Protein accession | YP_479182 |
Protein GI | 86738782 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03620] probable F420-dependent oxidoreductase, MSMEG_4141 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC CGCCGGCCCG GCGTGAGATC GGCAAGGTGG GGATCTGGAG TGGCCAGTTC GACTTCTCCC CGGCCGCGGT CGTCCGGGAG GCGGTCGCGG AACTCGACGA TCTCGGTTAT CCGACGTTGT GGACCGGTGA GGTCAAGGGG CGCGAGGTGC TGGTCACCGC CGCTCTGGCG CTCGCGGCCA CCTCCCGGAT GACGATCGCG ACCGGGATCG CGCAGATCCT CGCCCGTAAC CCGCTCACCA TGACCGCCGG TCAGCTGGCC CTCGCCGAGG CGTACCCGGA CCGGTTCCTG CTCGGGCTCG GGGTGTCCCA CGCCGAGCTG ATGCACATCC GGGGCGCCTC CTACACGCGC CCACTCGCCC AGATGGCGGC GTACCTCGAC GAGATGGACC GGATGGCGGT CGAGCAGTAC CGGGCCGTGC CACCGCCCGG TGTCCCGCCA CGGGTGCTCG CCGCGCTCGG TCCGAAGATG CTCGGCCTCG CCCGGGACCG GGCCGACGGC GCCCACACCT ATTTCGTGCC ACCCGAGCAC ACCGCTGCCG CCCGGGACAT CCTTGGGCCC GGCAAGCTGC TCGTCCCCGA GCAGGCGTTC GTCTTGCACA CCGATCCGGA ACAGGCCCGT GAGCTCGCCC GCCGGCACAC CGGGTCCTAT CTTCGGCTGC CGAACTACAC GACGAACCTG CGGCGCTTCG GGTTCGACGA CGACGATCTC GCCGGCTCGG GCTCGGACCG CCTGGTCGAC ACGATCGTCC CCTGGGGGGA CGCGGACGTC CTGCTCGGGC GGATCAAGGA GCATCTCGAC GCCGGGGCCG ATCAGGTGGC CGTGCAGGTG CTTGACTTCG ACCGCCGTGG GCTGCCGCGT CGGCAGTGGC GCGAACTGGC ACCGGTGCTG TCGGCACTCT GA
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Protein sequence | MSRPPARREI GKVGIWSGQF DFSPAAVVRE AVAELDDLGY PTLWTGEVKG REVLVTAALA LAATSRMTIA TGIAQILARN PLTMTAGQLA LAEAYPDRFL LGLGVSHAEL MHIRGASYTR PLAQMAAYLD EMDRMAVEQY RAVPPPGVPP RVLAALGPKM LGLARDRADG AHTYFVPPEH TAAARDILGP GKLLVPEQAF VLHTDPEQAR ELARRHTGSY LRLPNYTTNL RRFGFDDDDL AGSGSDRLVD TIVPWGDADV LLGRIKEHLD AGADQVAVQV LDFDRRGLPR RQWRELAPVL SAL
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