| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0056 |
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| Symbol | |
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| ID | 3905391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 70854 |
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| End bp | 72428 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637877386 |
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| Product | dehydrogenase subunit |
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| Protein accession | YP_479179 |
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| Protein GI | 86738779 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCAGC GACAGTTCCG GCTCCCTGAC CTCGGCGAAG GTCTGACCGA GGCGGACATC
GTCCGGTGGC TTGCCCAGGT CGGGGACACC GTCACGGTGA ACCAGCCCCT CGTCGAGGTC
GAGACCGCGA AGGCGGTCGT CGAGGTCCCC AGCCCGTTCG CCGGGATCCT GGTCGAGACC
CACGGCGCCG AGGGAACGAC CCTCGCGGTC GGCGCACCCC TGCTGACCAT CCAGACCGCC
GACACCGACA CCTACGTCGA CACCGACACC AACGCCGACG GGACGGGTGG GAACGGGACG
GGTGCGAACA GCCTGCCGAC ATCCCGGGAC GCTGGCAGCA TCGAGCGCAC CCCCGTCCTC
GTGGGCTATG GACCGAGGAC GGCCGAGAGC CGCCGGCGCC GCCCTCGACG ACCACCTACG
CCAGCCGGTC CGGTCCACAC AGCCGGTCCG GTCCACACAG CCGGTCCGGT CCACACAGCC
GGTCCGGTCC ACACAGCCGG TCCGGTCCAC ACAGCCGGTC CGGTCCACAC AGCCGGTCCG
GTCCACACAG CCGGTCCGGT CCACACAGCC GGTCCGGTCC ACACAGCCGG TCCGGTCCAC
ACAGCCGGTC CGGTGCTCGC CAAACCGCCG GTCCGCAAGC TCGCCCGTGA CCTCGGTGTC
GACCTCGCAT CCCTCGCCGG CACCGGCCCG GACGGCACGA TCAGCCGGGC CGACGTCGAG
GCCGCGGTGC GTGCCGCCGC CCGTACCGCG CCCCTCGCGG CGCCGCCCAC GCGCGATGCC
CCGCCGATCG GCGTCATCCC CGCCGGGGCC ACCTTCTCCG CCGAGACGCG TACCTGGCAC
GTGCCTGTCA CCGGCATCCG GCGGTCGATG GCGCAGGCGA TGGTCGCCAG CGTCTCGGCT
GCCCCGCATG TCACCGAGTT CCTCACCGTC GACGCGACGG CGACGATGGC CGCCCGGGAC
CGGATCGCGG CGCTGCCGGA GTTCACCGGG ATCAAGATCA CCCCATTGCT GTTCGTCGCC
AGAGCCCTGC TCATCGCCGT TCGCCGACAT CCGATGATCA ACTCATCCTG GGTCGAGGAC
GCGGGCGGTG GCCGGCCGGA GAACGGTGGC CGGCCGGAGA ACGGTGGCCG GCCGGAGATA
CATGTGTACG ACCGGGTGAA CCTCGGCATC GCCGTGGCGG GCCCGCGTGG GCTCGTCGTG
CCCACCATCC CGGATGCCGG CCGGCTCGAC GTCGTCGGGC TGGCTCACGC CCTGGCCGGC
CTCACCACCG CGGCGAGGGC GGACCGGCTC AGCCCCGCGG ATCTGCGCGG CGGCACGATC
ACCATCACCA ACGTCGGCGT CCTCGGCGTC GACATCGGCA CCCCGATCCT GAACCCGGGC
GAAGCGGCGA TCCTCGCCCT CGGCTCGATC CGACCGATGC CCTGGGTGCA CGAGGGCCAG
CTCACCGTGC GTACGGTGGT ACAGCTGGCA CTCTCGTTCG ACCATCGCAT CGTCGACGGC
GCGCTGGGCT CCGCGGTCCT CGCCGACGTG GGTGCCGTCA TCACCGATCC CACGGTGGCA
CTCGCCTGGT CCTGA
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| Protein sequence | MTQRQFRLPD LGEGLTEADI VRWLAQVGDT VTVNQPLVEV ETAKAVVEVP SPFAGILVET
HGAEGTTLAV GAPLLTIQTA DTDTYVDTDT NADGTGGNGT GANSLPTSRD AGSIERTPVL
VGYGPRTAES RRRRPRRPPT PAGPVHTAGP VHTAGPVHTA GPVHTAGPVH TAGPVHTAGP
VHTAGPVHTA GPVHTAGPVH TAGPVLAKPP VRKLARDLGV DLASLAGTGP DGTISRADVE
AAVRAAARTA PLAAPPTRDA PPIGVIPAGA TFSAETRTWH VPVTGIRRSM AQAMVASVSA
APHVTEFLTV DATATMAARD RIAALPEFTG IKITPLLFVA RALLIAVRRH PMINSSWVED
AGGGRPENGG RPENGGRPEI HVYDRVNLGI AVAGPRGLVV PTIPDAGRLD VVGLAHALAG
LTTAARADRL SPADLRGGTI TITNVGVLGV DIGTPILNPG EAAILALGSI RPMPWVHEGQ
LTVRTVVQLA LSFDHRIVDG ALGSAVLADV GAVITDPTVA LAWS
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