Gene Francci3_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0040 
Symbol 
ID3903519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp49299 
End bp50174 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content76% 
IMG OID637877370 
Producthypothetical protein 
Protein accessionYP_479163 
Protein GI86738763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0902306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTGCC GTCCCGACCC TCCGACGACG ACGAAGTGCT CACCGTTGAC GAACTGGTCG 
CCTGGTTGCG GTTGTCGGAG AGCACCGTCC TCAAGCTGCT TTCGGAACGG GCCATCCCGG
CTCGCAAGGT CGGTCACCAG TGGCGGGTGC GTCGGGGGCG GGTGCGGGAC TGGCTGGACG
GTCGGGAATG AGCGCTCTCA CCCCGGTGCC GCCTCGCTCC GGCCGGCCGC GGTGAAGCCC
CGCCCCTGGC TGGCCGTCGG GCTGCTGCTC ACCGTGGTCA CCGTGGCCGG ATGCGGCGTG
TCGGGTAGTA CTGCCGGTCC GTCTCCCGCC CCGTCCGCCA CCACGGGGCC ACCGCCCGGG
GCGAGTCAGG CGCCGGGTCC GCCGCTGGCC ACCGCGTCCG CGCCACCAAC CGGCGAGGTG
GACCGGAAGG ACCCGTCGGC GGTAGCCGCC GACTGCTTCA CACGCTGGCA GTCCTTCGAC
GCCCGGACGG ACCCCGGCCC GGCAGCCGGT GTCGAGCGGG CCCGCGACTG CCTCACCGAG
GACTTCGCGG CCAGCCTGGG CGCCGGGGGC GCGGGCGCCG GGGGGTCCGG AACCGCTGCC
GGTGGGGACG GTCAGGCGTG GCAGGAGGTG CGCGCCGCGG GCACCCACTC GCGGGTGACC
GTGCTGGCGA CCACGCCCCT GGGCGGGATC GACACGACGG CCACCGGTCG GGTGGTGCTT
CAGCTGAACG TGCGCCGCGA GACGGCGGCG GGCGGCGCCG CCCCGGTGGT GACGCTGTCC
ACCCCCGCGC TCACCCTCCT GCGCCAGACC GACGGGACGT GGCGGGTCGC CGGTGCGGAT
CTGTCGAGCG TCGCCGGTGA CGCACCGGGC CGGTGA
 
Protein sequence
MACRPDPPTT TKCSPLTNWS PGCGCRRAPS SSCFRNGPSR LARSVTSGGC VGGGCGTGWT 
VGNERSHPGA ASLRPAAVKP RPWLAVGLLL TVVTVAGCGV SGSTAGPSPA PSATTGPPPG
ASQAPGPPLA TASAPPTGEV DRKDPSAVAA DCFTRWQSFD ARTDPGPAAG VERARDCLTE
DFAASLGAGG AGAGGSGTAA GGDGQAWQEV RAAGTHSRVT VLATTPLGGI DTTATGRVVL
QLNVRRETAA GGAAPVVTLS TPALTLLRQT DGTWRVAGAD LSSVAGDAPG R