Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0040 |
Symbol | |
ID | 3903519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 49299 |
End bp | 50174 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637877370 |
Product | hypothetical protein |
Protein accession | YP_479163 |
Protein GI | 86738763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0902306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTGCC GTCCCGACCC TCCGACGACG ACGAAGTGCT CACCGTTGAC GAACTGGTCG CCTGGTTGCG GTTGTCGGAG AGCACCGTCC TCAAGCTGCT TTCGGAACGG GCCATCCCGG CTCGCAAGGT CGGTCACCAG TGGCGGGTGC GTCGGGGGCG GGTGCGGGAC TGGCTGGACG GTCGGGAATG AGCGCTCTCA CCCCGGTGCC GCCTCGCTCC GGCCGGCCGC GGTGAAGCCC CGCCCCTGGC TGGCCGTCGG GCTGCTGCTC ACCGTGGTCA CCGTGGCCGG ATGCGGCGTG TCGGGTAGTA CTGCCGGTCC GTCTCCCGCC CCGTCCGCCA CCACGGGGCC ACCGCCCGGG GCGAGTCAGG CGCCGGGTCC GCCGCTGGCC ACCGCGTCCG CGCCACCAAC CGGCGAGGTG GACCGGAAGG ACCCGTCGGC GGTAGCCGCC GACTGCTTCA CACGCTGGCA GTCCTTCGAC GCCCGGACGG ACCCCGGCCC GGCAGCCGGT GTCGAGCGGG CCCGCGACTG CCTCACCGAG GACTTCGCGG CCAGCCTGGG CGCCGGGGGC GCGGGCGCCG GGGGGTCCGG AACCGCTGCC GGTGGGGACG GTCAGGCGTG GCAGGAGGTG CGCGCCGCGG GCACCCACTC GCGGGTGACC GTGCTGGCGA CCACGCCCCT GGGCGGGATC GACACGACGG CCACCGGTCG GGTGGTGCTT CAGCTGAACG TGCGCCGCGA GACGGCGGCG GGCGGCGCCG CCCCGGTGGT GACGCTGTCC ACCCCCGCGC TCACCCTCCT GCGCCAGACC GACGGGACGT GGCGGGTCGC CGGTGCGGAT CTGTCGAGCG TCGCCGGTGA CGCACCGGGC CGGTGA
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Protein sequence | MACRPDPPTT TKCSPLTNWS PGCGCRRAPS SSCFRNGPSR LARSVTSGGC VGGGCGTGWT VGNERSHPGA ASLRPAAVKP RPWLAVGLLL TVVTVAGCGV SGSTAGPSPA PSATTGPPPG ASQAPGPPLA TASAPPTGEV DRKDPSAVAA DCFTRWQSFD ARTDPGPAAG VERARDCLTE DFAASLGAGG AGAGGSGTAA GGDGQAWQEV RAAGTHSRVT VLATTPLGGI DTTATGRVVL QLNVRRETAA GGAAPVVTLS TPALTLLRQT DGTWRVAGAD LSSVAGDAPG R
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