Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1078 |
Symbol | |
ID | 5452408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1178089 |
End bp | 1179039 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874846 |
Product | ISCpe7, transposase |
Protein accession | YP_001410583 |
Protein GI | 154249758 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000101857 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAACT CAACGCTCTC TTGTCCAAAA TGCGGTTCCA CCAGCTTATA CAAAAACGGT CATGACAAAT ACGGTAACCA ACAATTCCTT TGCAAACTCT GCCATCATTC TTTCAAACTC TCCCATTCTC AAAAACGCAA AAACTTCCCT TTCCCTTATC CCAAATGCAC TTCTTGTGGT AAATCTATGC AAATTTACAA AGTCCGTCGC TCTTTCGTTG TCTTCCGTTG TAGAGCTTGT CGTACCAAAG ATAGAGTACC TTTTAACCTC CCCGAACCAG TCACCCTTAT TCCTGAGAAA TTTAAATATT TCCGCTTCCC TATCTTTTTC GTCTTAAAGG CTTTTGTTTT GTATATGAAA CACAATATGT CTTATCGCTC TCTTGCTCAT TCTCTTAATA TCAAAGTATC TCATGTCACC ATATACAAAT GGGTTATTAA ATTGTGTACT TTATTCTCTG TACTTTTTCC AACATTTACC ATCGAAAATG TTTTCTCAGT TCATGCTGAT GAAACTGTTC TTGTGTTCAA AGAACAAAAG TACTATGTTT GGCTATTAGT TGATCACGAA ACTAACTTAA TTCTTTGTTG GCATGTCTCA AAGTATCGTG ATATGGGACA AGTCAAAGTA TTGCTCGAGA AGTTCTTTGG TAATTCAAAA CCTAGAAACA TTGAACTTAT TACTGATGGA CTTGGTGCAT ATGAAAGTGC AGTAAAGCTG TTGTTCAGAA ATATCAATCA CGTAGTGGTA CCGCTCGGTA AAAACAATCA ATGTGAATCT AAGTTTTCAT TGTTGAAAGA CTTTTTCCGA CTCAAGCGAG GGCTGAAGAA TACGAAGAAC TTAGCGAAAT ATATTCAAGG ATTTTGTGTA GTGAAGAATC TTTGGAAAAC GCACAATGGC AATATCAATC GCATTCTTTC ACAATTACAC TCTTTCATCA CTACAAGTTA A
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Protein sequence | MNNSTLSCPK CGSTSLYKNG HDKYGNQQFL CKLCHHSFKL SHSQKRKNFP FPYPKCTSCG KSMQIYKVRR SFVVFRCRAC RTKDRVPFNL PEPVTLIPEK FKYFRFPIFF VLKAFVLYMK HNMSYRSLAH SLNIKVSHVT IYKWVIKLCT LFSVLFPTFT IENVFSVHAD ETVLVFKEQK YYVWLLVDHE TNLILCWHVS KYRDMGQVKV LLEKFFGNSK PRNIELITDG LGAYESAVKL LFRNINHVVV PLGKNNQCES KFSLLKDFFR LKRGLKNTKN LAKYIQGFCV VKNLWKTHNG NINRILSQLH SFITTS
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