| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0612 |
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| Symbol | |
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| ID | 5452545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 680010 |
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| End bp | 680981 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640874353 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001410124 |
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| Protein GI | 154249299 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR03151] putative enoyl-(acyl-carrier-protein) reductase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000694328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA GAGTTTGTGA GCTTTTAGGT ATAAAGTACC CGATAATAAT GGGAGGAATG
TCTTGGGCAG GCACACCCAA ACTTGCCGCA GCCGTCTCAA ACGCGGGTGG ACTTGGCATC
ATCGGTTCTG GTGCGATGAA GGGCGAGCAT TTGAAAAAGG CGATTGATGA AATTCGACAA
CTCACAGATA AGCCGTTCGG TGTAAATATA ATACTAGTGT CCCCTTATGC GGATGAGCTT
GTGGATTTAG TAATTCAAGA ACGCGTACCA GTTGTAACGT TCGGTGCGGG TAATCCTTCA
AAATACATTG CTAAGTTAAA AGAAATCGGT ACGAAAGTGA TACCGGTAGT TGCTTCAGAC
AATATGGCGA AGATGATGGA GCGAATAGGA GCAGATGCGG TCATAGCCGA AGGTATGGAA
TCTGGAGGGC ACATAGGTGA GGTAACAACA CTTGTCCTTG TTAACGCAGT ATGCAGAAGC
GTAAGTATCC CTGTTATCGC AGCAGGTGGA ATAGCGGACG GGAAGGCTAT GGCAGCCATG
TTCGCTTTAG GTGCGGAAGG TATCCAAATG GGTACAAGAT TTATAGCTAC TTACGAAGCT
GATACACACG AAAACTTCAA AAAATTAATT GTAAAATCCG GTATCAGAGA TACCGTTGTA
ACTGGTGCAA CTTTAGGTCA TCCTGCAAGA GTAATCGAAA CGAGATTTGC AAAGAAAGTA
AGAGAATTGG AGGTTGAAAA TCTCCAGGAA GCAGAGGAAG TTCTTGTCGG TAGTTTACGT
AAAGCGGTTG TTGATGGTAA TATAGACGAA GGTTCATTCA TGGCTGGTCA GTGCGTTGGA
TTAATTAACG AAATTAAACA CGTTGACGAG GTTATACAAG ACATAATGAG AGAATTCACA
CAAACTCTGG AAAAGTTGAA TAACGTAAGA ATGGAGATTT ACAACGATTT GGAATTGACT
TACAGTAAGT AA
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| Protein sequence | MKNRVCELLG IKYPIIMGGM SWAGTPKLAA AVSNAGGLGI IGSGAMKGEH LKKAIDEIRQ
LTDKPFGVNI ILVSPYADEL VDLVIQERVP VVTFGAGNPS KYIAKLKEIG TKVIPVVASD
NMAKMMERIG ADAVIAEGME SGGHIGEVTT LVLVNAVCRS VSIPVIAAGG IADGKAMAAM
FALGAEGIQM GTRFIATYEA DTHENFKKLI VKSGIRDTVV TGATLGHPAR VIETRFAKKV
RELEVENLQE AEEVLVGSLR KAVVDGNIDE GSFMAGQCVG LINEIKHVDE VIQDIMREFT
QTLEKLNNVR MEIYNDLELT YSK
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