| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0531 |
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| Symbol | |
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| ID | 5452651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 586288 |
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| End bp | 587448 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874280 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001410051 |
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| Protein GI | 154249226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000267349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGT TACTGAGTGT TTTGTTGTTC TTAGGTTTGT TTGTGAGTAT ATTTGCAGAG
GTTGGAGTTT ACAACGATAA GGTGGTTATT GGAACATTTC AAGCATTATC AGGTCCTTAT
GCAGTTATCG GTCAAGAAAT GACAAAAGGT ATGAAAGCTT ACTTCAATTG GGTTAACAAC
CGTGGCGGAG TTTACGGAAG AAAGATTGAA CTCATAGTCG CTGATGATCA GCTTAATCCC
GCGAAGACAG TTGTTGAAGT AAAAAGACTT GTTGAGCAAG ATAAGGTTTT TGCCATAGTT
GGTGGGCTCG GTACCTATGG TTGTCTTGCC GTTATGGATT ATCTTGAACA AAACAAAGTA
CCGTTCGTTT ACCAAGGTGC GGGTACATCA AAGCTTGTTG TTCCTCCAAA AAGATATATA
TTCGGTGTGC AACCAGACTA CACACTTGAA GGTACACTCA TCGCAAAGTA CGTCGGAGAA
ATTGCTAAGT TCAAATCACC AGCTATTGTT TACATGAACA ACGATATTGG TTTAGAAGGA
TACACTGCAT TTAAAGGTAA ACTCAGTGAT TACAAAATGT CACCAGTTGT GGAAATTTCC
TACAACCCGG CGGATACAGA TTACAGTGGT TTAGTTGTAA AATTAGTCGA GAAGAATCCA
GATGTTGTAA TTATCTACGG ACTTATAACT GATACAATCA GATGGATTAA GACAATAAGA
GATTACGGTC TTAACAGTAA GATTATAACG ATTTATCCTA ATGCTGATCC ATCATTCATT
AGCCTTGCTG GAAATTACGC TGAAGGTGTT ATCTTCACAG GATGGGTCCC ACTCGCAACA
CCAGATAGAC CTGATTTCGT TAGGGATTAT CAGAGGGCTA TTTCCATATT CCAAATTACT
TATCCAAAGC AAATTCCATC TTCATACGCT GTTGCTGGTT TTATAGCAGC TGAGGTATTT
ACAGAAGGAC TTGTCAGAGC TGGTAAGAAT CTTACAAGAG AAGGACTTGT AAAAGCACTT
GAGAGTTTCA AGAATTGGAA TGGAATTCTT GCAAAGGATA TAACATGGGG ACCAAATCTA
AGACGCGGTA AGTCATCGAT GTACCTCATG GTTGTTAAAA ACAAACAGTT TGTTCCACTA
ACAGATTTAA TAAGGCCATA A
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| Protein sequence | MRKLLSVLLF LGLFVSIFAE VGVYNDKVVI GTFQALSGPY AVIGQEMTKG MKAYFNWVNN
RGGVYGRKIE LIVADDQLNP AKTVVEVKRL VEQDKVFAIV GGLGTYGCLA VMDYLEQNKV
PFVYQGAGTS KLVVPPKRYI FGVQPDYTLE GTLIAKYVGE IAKFKSPAIV YMNNDIGLEG
YTAFKGKLSD YKMSPVVEIS YNPADTDYSG LVVKLVEKNP DVVIIYGLIT DTIRWIKTIR
DYGLNSKIIT IYPNADPSFI SLAGNYAEGV IFTGWVPLAT PDRPDFVRDY QRAISIFQIT
YPKQIPSSYA VAGFIAAEVF TEGLVRAGKN LTREGLVKAL ESFKNWNGIL AKDITWGPNL
RRGKSSMYLM VVKNKQFVPL TDLIRP
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