Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0310 |
Symbol | |
ID | 5452639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 336277 |
End bp | 338502 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640874055 |
Product | ATPase |
Protein accession | YP_001409832 |
Protein GI | 154249007 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000412877 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATTTA ACATGGAGGA CTTCACGGAA AATGCTCAAG AGATACTCCA GTCTGTTAAC GACGTCTTAA ATCGTTACAG ACAAAACCAG TTGGCGCCTG AGCATATTTT GTTAACTATG CTTGAAAACA CTAAAACCGC AGCTGTAGAT ATTCTTACTT TCCTCAATGT TGATACGGAT GCGTTGAGAA GAGATGTTGA AAGGATTATT TCTTCAAAAG GTGGTTATTA CTATTCTGGC AGCGGTGGTA CAAACCAAAT TTACATAACC CCAGATACAA CAAAAGTTAT TAACGAGGCA AAACGCGAAG CGAAAAGAAT GGGAGATGAA AAGGTTGGTA CAGACCACTT ACTTTTAGCA ATGGCTATTG TACCAGAGAC AACAACTTAT AGGTTATTGA GTAAATACGG GGTAACACAA GATGCGCTTT ACAGTGCTAT AAAACAATTA AGAATGCAAA GGACTTATTC TGAAGAAGAA AACATCGACA TTCTTGCAAA GTTTACTGAA AACCTCACCG AAATGGCAAA AAACGGACAA CTCATGCCTG TAGTTGGCCG TGAAAATGAA ATCAACAGGA TGATTGAGAT ACTTGGACGC AAGATTAAGA ACAACCCCGT TCTGATAGGT GACCCAGGCG TTGGTAAAAC AGCGATTGTT GAAGGGCTTG CGCAAAGGAT TGTTAATAAG GACGTGCCAG AATTCTTGAA GAATAAAACA ATACTTAAAT TAGACCTTGC AAGATTGGTT GCTGGTACGA AATTCAGAGG GGAATTCGAG GAAAGACTAA AAAAACTTAT AGACGTACTT AAGAAGAGAA CAGACGTTAT ACTCTTTATC GACGAATTAC ACACAGTTGT TGGTGCTGGT GCCGCTGAGG GTGCACTTGA TGCAGGTAAC ATTCTAAAAC CAGAGCTTGC CCGTGGAACG TTAAGGGTTA TCGGTGCGAC TACAGTTGAA GAATACAGGA AACATATTGA AAAAGACAAA GCGTTAGCAA GAAGATTCCA AGTAATCTTT GTCCCAGAAC CAAGTATAGA AGAAACCATC GAAATCTTGA AAGGTTTGAA GGCCAAATTT GAAGAATTCC ACAACGTCTC TATAAGTGAT AAGGCAATTG AGTTTGCGGC GAAGATGTCC GCAAGGTATA TCACCGACAG ATTTTTGCCA GACAAAGCAG TTGATCTTGT AGACGAAGCT GCGGCAAGAG CAAAAATTGA TGGAAAGAAA GAAATAGTTG AAGAAGATAT CGCAAGTGTT ATTGAAAGAT GGACGGGTAT CCCCGTCGGT AAAATAATGG GTGATGAAAA GGAAAAGATA AAGAACCTTG AAAAGATAAT ACATGAAAAG TTTGTTGACC AAGAAGAAGC AGTGAAGATT GTTTCGAATG CAATCAAAAT GTCCCGTGCA GGTATTAGAA ATCCAAAAAG ACCACTTGGT GTGTTCTTGT TCCTCGGACC AACCGGAGTT GGTAAGACAG AGCTTGCTAA GAGATTAGCG GATGTACTAT TTGGTAGTGA AAAAGCGCTT ATAAGAATCG ATATGAGCGA ATATATGGAA AAGCATTCAG TAGCCAGACT TATAGGTGCA CCTCCGGGAT ACGTTGGTTA TGAAGAAGGT GGTCAATTAA CAGAGCAAGT TAGAAGAAGA CCTTACAGTG TAGTGCTCTT TGACGAAATT GAAAAGGCGC ACCCAGAAGT GTTCAATGTA CTCTTACAGT TATTTGATGA TGGAAGACTT ACAGATGGTA AAGGGACGAC AGTTGACTTT AGGAATACCA TAATCATAAT GACAAGTAAC ATTGGTTCAG ATGTTATAAT GCAAGACATT GAAGAGGGTT TCGAAGACTT GATACCAAGA CATATAGAAG AAGAAATGAG GAAATACTTC CGCCCAGAGC TTATAAACAG AATAGATGCG GCTGTAGTCT TTAAGCCTCT TAAGAAAGAA CACATCAAGG AGATAATCGA AATATACACA AAGGAATTAA ACGAAAGACT CATCGATTCA GATAAAGATA TAAAGGTTGT TCTTGATGAG AGTATGAGAG AATACCTTGC AACTGAGGGG TACGTTCCGT CAATGGGAGC AAGGCCTTTG AGAAGATTAT TTGAGAATAC TGTAGAATTT AAGCTTGCAG AACTCATAAT TGATGAAAAA GTAAAAGAAG GCCAAACTGT AAAGTTTATT TGGGAAGAAG GAATATTAAA GTGGGAAATT TTATAA
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Protein sequence | MVFNMEDFTE NAQEILQSVN DVLNRYRQNQ LAPEHILLTM LENTKTAAVD ILTFLNVDTD ALRRDVERII SSKGGYYYSG SGGTNQIYIT PDTTKVINEA KREAKRMGDE KVGTDHLLLA MAIVPETTTY RLLSKYGVTQ DALYSAIKQL RMQRTYSEEE NIDILAKFTE NLTEMAKNGQ LMPVVGRENE INRMIEILGR KIKNNPVLIG DPGVGKTAIV EGLAQRIVNK DVPEFLKNKT ILKLDLARLV AGTKFRGEFE ERLKKLIDVL KKRTDVILFI DELHTVVGAG AAEGALDAGN ILKPELARGT LRVIGATTVE EYRKHIEKDK ALARRFQVIF VPEPSIEETI EILKGLKAKF EEFHNVSISD KAIEFAAKMS ARYITDRFLP DKAVDLVDEA AARAKIDGKK EIVEEDIASV IERWTGIPVG KIMGDEKEKI KNLEKIIHEK FVDQEEAVKI VSNAIKMSRA GIRNPKRPLG VFLFLGPTGV GKTELAKRLA DVLFGSEKAL IRIDMSEYME KHSVARLIGA PPGYVGYEEG GQLTEQVRRR PYSVVLFDEI EKAHPEVFNV LLQLFDDGRL TDGKGTTVDF RNTIIIMTSN IGSDVIMQDI EEGFEDLIPR HIEEEMRKYF RPELINRIDA AVVFKPLKKE HIKEIIEIYT KELNERLIDS DKDIKVVLDE SMREYLATEG YVPSMGARPL RRLFENTVEF KLAELIIDEK VKEGQTVKFI WEEGILKWEI L
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