Gene Fnod_0259 details

Gene Information

• Locus tag: Fnod_0259
• ID: 5453149
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 269285
• End bp: 271171
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640874005
• Product: ferrous iron transport protein B
• Protein accession: YP_001409782
• Protein GI: 154248957
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0370] Fe2+ transport system protein B
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00437] ferrous iron transporter FeoB

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00038951
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAATAA CAGTCGGTCT TCTTGGAAAT CCAAATGTAG GCAAGACTAG TTTATTCAAC 
AAACTTGTTG GCGCGCGCCA ATACGTTGCG AATTGGCCGG GTGTTACAGT TACAAGAATT 
GAAGGCGCAA CAAGCTATAG GGACTATACA TTACACTTCG TTGATTTACC AGGTGTTTAT 
TCGCTTTCTG CTACTTCTTT AGATGAAAAG GTTACACGAG ACTTTCTTCT TTTTACTCCT 
CCAAATGTCA CGGTCGTTGT TATAGATAGC ATGACACCTG AACAAGGTAT GTACCTTTTG 
TTAGAATCTC TTGAACTAGG CTTAAATGTT GTTGCAGTTT TTAACACTAT AGACGAAGCA 
AAGAAGAATG GCATAAACAT CGATAAAGAA GCGTTACAAA CATTTTTGGG TGTACCAGTA 
GTTCTAACTT CCGCCCATAC AGGTGAAGGT ATTGACGAAT TGAAGGAAAC GATAATTAAC 
TCATTTAAAA AGGTAACGCG AACAAAATTA TTTGAATATG GCGAAGAAAT AGAAAATCTA 
ATAAAGAAAG TAGAAAATTG CGTCTCAAAC GAATACAACA AAAGATTTAT GGCAATAAAA 
TACCTTGAGA ACGATAAATT CGTTCGTGAA TTAATAAATA ATTGCGACTT TACAACAGAT 
GAATCAATAG CCACGGAAAT AGCTAAAAAG AGGTATGAAT ACATAACCGC AATAATTTCG 
AGATGTTTTA CCAAATCGAA CAATTTGTTA TCCACCATGG AAGCTTTAGA CCATGTTTTA 
ACGCACAAAT ATTTAGGCAT ACCTATATTT ATTTCACTCA TTTATTTAGC ATTTAACTTT 
ACATTTAAAA CTTCGGAACC TTTAGTTGGA CTTTTGGAAT TCCTATTTGG AAAACTTGTC 
GAATTTATAG GAAACGACAC TATGTTTAAA TCTTTAATAT CTGATGGAAT TATAAATGGC 
GTTGGAAGTG TTTTAGCTTT TATACCAAGC ATATTTGCCT TATTCTTTGC ACTTGGGATA 
ATGGAAGAAA GTGGATATTT ACCAAGAATA GCATTTATTA TGGATAAATT AATGTACTCT 
CTAAGACTGA CAGGTCGTTC ATTTATGACC TTACTCTTAG GGTTTGGTTG CAACGTCAGT 
TCAATAATGG CAGCTCGTGG CTTATCTGAC GAGCGAGAAA GAATAACAAC CATTTTGGTG 
TCTCCATTCA TAAGTTGTAA CGCACGAATA CCTGTTTATC TAATGATAAT AGGCGTGGCT 
TTTTCGCAAT ACAAAGCTGA AGCTTTCTTT TTAATTTATC TTTTAAGTAT AGTACTTACC 
GCTATCTCAT CAAGAATTGT CAACAAAGTT ATACTTAAAG GAGAAACTGT ACCTTTTATA 
ATGGAATTAC CACGGTACAG GCTTCCAAAA TTATCAAATA TAGCAGTGTA TATGTGGAAC 
AGAGGTAAAC ATTTTATCGA AAAAGCTGGA ACAATAATCT TTGCAGCAAG CATAATTGTA 
TGGGCACTCT CGTATTTTCC AGATCCAAAC AATATTGAAA ATAGTTTTGT TGCCATGATT 
GGCAAATCTC TAGAATTCTT ATTTAGGCCT TTAGGTTTTT CATGGCAAAC AGTTTCCGCA 
CTTATATTTG GTGGTGTAGC AAAAGAAATT ATAGTATCAT CATTCTCACA ATTCTACAAC 
GGTATTGAAA ACGTAGTGCT TTCACCTGCT ACAGCAGCGA CGTTGATGGT ATTTGTTCTA 
GGTTACATAC CTTGCTTTGC AACACTTGCA GCTATAAAGG CGGAAACAAA TAGTAACAAA 
TACACGTTGT TTGCGATACT TTATAGTTTA ACCATTTCTT ATTTTATCGC ATTTTTGGTT 
AATATTTCTT GGAGGCTGTT ATCATGA 

 

Protein sequence

MVITVGLLGN PNVGKTSLFN KLVGARQYVA NWPGVTVTRI EGATSYRDYT LHFVDLPGVY 
SLSATSLDEK VTRDFLLFTP PNVTVVVIDS MTPEQGMYLL LESLELGLNV VAVFNTIDEA 
KKNGINIDKE ALQTFLGVPV VLTSAHTGEG IDELKETIIN SFKKVTRTKL FEYGEEIENL 
IKKVENCVSN EYNKRFMAIK YLENDKFVRE LINNCDFTTD ESIATEIAKK RYEYITAIIS 
RCFTKSNNLL STMEALDHVL THKYLGIPIF ISLIYLAFNF TFKTSEPLVG LLEFLFGKLV 
EFIGNDTMFK SLISDGIING VGSVLAFIPS IFALFFALGI MEESGYLPRI AFIMDKLMYS 
LRLTGRSFMT LLLGFGCNVS SIMAARGLSD ERERITTILV SPFISCNARI PVYLMIIGVA 
FSQYKAEAFF LIYLLSIVLT AISSRIVNKV ILKGETVPFI MELPRYRLPK LSNIAVYMWN 
RGKHFIEKAG TIIFAASIIV WALSYFPDPN NIENSFVAMI GKSLEFLFRP LGFSWQTVSA 
LIFGGVAKEI IVSSFSQFYN GIENVVLSPA TAATLMVFVL GYIPCFATLA AIKAETNSNK 
YTLFAILYSL TISYFIAFLV NISWRLLS