| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2402 |
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| Symbol | |
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| ID | 5092134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 2875443 |
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| End bp | 2877347 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644741830 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001194748 |
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| Protein GI | 146300157 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.208521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT TTGAACAATT AGGATTGAAT GAATCGTTAC TGAAGGCGAT TTTAGATCTA
GGATTTGAAA ATCCGTCAGA GGTACAGGAA AAGGCGATTC CCCTATTATT GGAAAAAGAC
ACAGATATGG TTGCGTTGGC TCAGACAGGG ACAGGGAAAA CGGCAGCTTT CGGTTTTCCG
CTAATTCAAA AAATTGATGC TGACAATAGA AACACACAAG CATTAGTTTT ATCGCCAACA
CGAGAACTTT GTTTACAGAT TACCAACGAA CTTAAAAACT ACTCAAAATA CGAAAAAGGT
ATTAATGTGG TAGCAGTTTA CGGCGGGGCT AGTATTACAG AGCAAGCTAG AGAGATTAAA
AGAGGCGCAC AAATTATTGT GGCTACTCCA GGAAGAATGC AAGACATGAT TAACAGAGGT
TTAGTTAACA TTAAAAATAT AGATTACTGT ATTCTTGATG AAGCTGATGA GATGTTGAAC
ATGGGATTCT ATGAAGACAT CGTATCTATT TTATCAGATA CTCCAGATCA AAAAAACACA
TGGTTGTTCT CTGCAACTAT GCCGCAAGAG GTTGCCAGAA TTGCAAAACA ATTCATGAGC
GAACCGGTTG AAATTACTGT TGGTGCTAAG AACTCAGGTT CTGCAACAGT TTCTCACGAA
TTTTACTTAG TAAATGCTCG TGATCGTTAC GAAGCTCTAA AACGTTTAGC AGATGCTAAC
CCGGATATTT TCTCTGTAGT TTTCTGTCGT ACTAAAAGAG ATACACAGGC TGTAGCTGAA
AAATTAATTG AAGATGGATA TAGCGCCGCT GCGTTACACG GAGATTTATC TCAGGCACAA
CGTGACGGGG TAATGAAATC GTTCCGTGGA AGACAAATTC AGATGCTTGT TGCTACTGAC
GTTGCTGCAC GTGGTATTGA CGTTGATAAC GTAACTCACG TTGTAAACTA CCAATTACCA
GATGAGATTG AAACTTACAA CCACCGTTCT GGACGTACAG GTAGAGCTGG AAAATTAGGA
ACTTCTATTG TAATCGTTAC AAAAAGTGAG TTACGTAAAA TTTCTTCTAT CGAGAGAATC
ATTAAACAAA AATTCGAAGA AAAAGCTATT CCATCTGGAA TTGAAATCTG CGAAATTCAG
TTATTACACT TAGCAAACAA AATTAAAGAT ACTGAGGTTG ATCACGAAAT TGACAACTAT
TTACCAGCAA TTAACAATGT TCTTGAAGAT TTATCTAAAG AAGAATTGAT TAAGAAAATG
GTATCTGTAG AATTTAACCG TTTCATTACT TACTACAAAA AGAATAGAGA TATCTCTACT
CAATCTTCTG GAGAAAGACG TGAAAGAGGT GATTCTGAGC CAAGAGAATT CAACAACAAC
GGAGCTGTTC GTTATTTTGT AAACATTGGT TCTAGAGACA ATTTTGACTG GATGTCTTTA
AAAGATTACT TGAAAGAAAC ATTAGACTTA GGTCGTGATG ACGTTTTCAA AGTAGATGTA
AAAGAAGGTT TCTCTTTCTT TAACACTGAT CCTGAGCACA CTGATAAAGT AATGGATATT
TTAAACAACG TTCAATTAGA AGGACGTCGT ATTAATGTTG AAATTTCTAA AAATGACGGA
GGCGGAAGAC GTGACCACAA CAATCGTGGC GGCGGAAGAA ATTCTGGCGG ACAAAGAAGA
GAAGGAAACT TCGCTCCAAG ACGTGAAGGT TCTGGCGGAG GTTTTAGAAG CGACAGAAAT
TCTGCTCCAA GACGTGAAGG TTCTGGAGGC GGATTTAGAA GCGACAGAAA CTCTGCTCCA
AGAGAAGGAG GTTTTAGAAG AAACGAAGGT GGTTCTGACA GAGCTCCAAG ACGTTCTGAA
AGTTTTGGTG ATTCATCAAG ACCAAGAAGA CCAAGAAGAG ATTAA
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| Protein sequence | MNKFEQLGLN ESLLKAILDL GFENPSEVQE KAIPLLLEKD TDMVALAQTG TGKTAAFGFP
LIQKIDADNR NTQALVLSPT RELCLQITNE LKNYSKYEKG INVVAVYGGA SITEQAREIK
RGAQIIVATP GRMQDMINRG LVNIKNIDYC ILDEADEMLN MGFYEDIVSI LSDTPDQKNT
WLFSATMPQE VARIAKQFMS EPVEITVGAK NSGSATVSHE FYLVNARDRY EALKRLADAN
PDIFSVVFCR TKRDTQAVAE KLIEDGYSAA ALHGDLSQAQ RDGVMKSFRG RQIQMLVATD
VAARGIDVDN VTHVVNYQLP DEIETYNHRS GRTGRAGKLG TSIVIVTKSE LRKISSIERI
IKQKFEEKAI PSGIEICEIQ LLHLANKIKD TEVDHEIDNY LPAINNVLED LSKEELIKKM
VSVEFNRFIT YYKKNRDIST QSSGERRERG DSEPREFNNN GAVRYFVNIG SRDNFDWMSL
KDYLKETLDL GRDDVFKVDV KEGFSFFNTD PEHTDKVMDI LNNVQLEGRR INVEISKNDG
GGRRDHNNRG GGRNSGGQRR EGNFAPRREG SGGGFRSDRN SAPRREGSGG GFRSDRNSAP
REGGFRRNEG GSDRAPRRSE SFGDSSRPRR PRRD
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