Gene Fjoh_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2190 
Symbol 
ID5092809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2645562 
End bp2646746 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content36% 
IMG OID644741619 
Productmajor facilitator transporter 
Protein accessionYP_001194537 
Protein GI146299946 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.637684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAT CAAAAACTAA TGTACTGTTT ATGGCAGTTT GCACTGGTCT TATAGTTGCA 
AATCTTTATT ACTGCCAGCC TTTAATTGTT TTAATTGCAA ACGAATTTAA AATTCCCGAA
GCCAGCGCCG GAACTATAAC ATATTTAACT CAGGCCGGTT ATGCCATTGG TTTGTTTTTT
ATGGTGCCGC TTGGTGATAA ATTAGAACGC AAAAAGCAGA TTTTAATTAC CACTTTTGCC
TCTGTAATTG CATTACTTAT TGCTGCAACA GCAAAAAGTT TTCTTATTTT GCAGATAGCT
TCTTTATTAA TTGGAATCAC TTCAATTGTA CCACAGCTTA TCTTGCCTTT GGCTGCTTCA
TTAAGTACGC CGGAACAACG AGGAAAAGTT ATCGGAACTA TTATGAGTGG GTTATTGGTC
GGAATCTTGC TTTCGAGAAC TTTAAGCGGA TTTATTGGTG AAGTTTTAGG CTGGAGATCG
ATGTTTTATA TCGCGGCCGG AATTTGTCTT TTGATCTTTT TTGTCATTCA AAATAAATTC
CCTGTAAATA AACCTCAGTT CAAAGGGACT TACGGGCAAT TAATCCAATC TTTATTTACT
CTTATAAAAA CACAGCCGGT TTTACGTGAA GCTACGGCAA TCAACGTATT TAGTTTTGCT
CAGTTTGGTG CTTTCTGGAC CACAATGGTT TTACTTCTTT CCGGACAACC TTTCCACTTT
AATAGTGCTA CAATTGGATT ATTTGGAATT GTAGGAGCTT CCGGAGCTTT AGCTGCACCT
TTGGTTGGAA AAATCGGAGA CAAAGGAAAT TCGCGAATAG CAGTTGGTTA TGGCTGTTTA
TTAATATTAA TAAGCTTTTT AATTTTCTAT TTTTCTATAG AAAGCGTAAT TGGAGTAGCC
ATTGGAATTG TGTTTATTGA TATTGGAATT CAGGGTGTTC ACATTTCAAA CCAAACACGA
GTTTATTCTC TATTGCCGGA AGCCAGAAAC AGATTAAATA CGGTATTTAT GTCGTTTAGC
TTTTTAGGAA CCGCTGCAGG ATCTGCTTAT GGATTGTTGT TGTGGAAACT GGGCGGATGG
CATGCCGTAA CAATTGGCTG TATGGTTTTA TCGTTATTAT CATTAACAGT TTACGGACTG
ACTTATAAAT CAAAATCTAA AAAGCAGAAA GCACAAATTG ATTAA
 
Protein sequence
MNLSKTNVLF MAVCTGLIVA NLYYCQPLIV LIANEFKIPE ASAGTITYLT QAGYAIGLFF 
MVPLGDKLER KKQILITTFA SVIALLIAAT AKSFLILQIA SLLIGITSIV PQLILPLAAS
LSTPEQRGKV IGTIMSGLLV GILLSRTLSG FIGEVLGWRS MFYIAAGICL LIFFVIQNKF
PVNKPQFKGT YGQLIQSLFT LIKTQPVLRE ATAINVFSFA QFGAFWTTMV LLLSGQPFHF
NSATIGLFGI VGASGALAAP LVGKIGDKGN SRIAVGYGCL LILISFLIFY FSIESVIGVA
IGIVFIDIGI QGVHISNQTR VYSLLPEARN RLNTVFMSFS FLGTAAGSAY GLLLWKLGGW
HAVTIGCMVL SLLSLTVYGL TYKSKSKKQK AQID