| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0796 |
|---|
| Symbol | |
|---|
| ID | 5093734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 887013 |
|---|
| End bp | 888554 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644740196 |
|---|
| Product | glycyl-tRNA synthetase |
|---|
| Protein accession | YP_001193149 |
|---|
| Protein GI | 146298558 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.412856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC AAGAAGATAT ATTTAAGAAT GTGGTTTCGC ACGCAAAAGA GTACGGATTT
ATTTTTCCGT CAAGCGAAGT GTACGACGGT TTAAGTGCAG TATATGATTA TGCACAAAAC
GGTGTCGAAT TAAAAAAGAA TATCCGTGAA TATTGGTGGA AATCAATGGT TCAGATGAAT
GAAAATATTG TGGGCCTTGA TGCTGCAATA TTAATGCATC CAACAACCTG GAAAGCTTCA
GGCCACGTTG ACGCCTTCAA TGATCCGTTA ATTGATAATA AAGATTCTAA AAAAAGATAT
AGAGCAGACG TTTTAGTTGA AGATTTTGCT GAAAAAATTC ATCAAAAAGC GCAAAAAGAA
ATTGACAAAG CAAAAGCTCG TTTTGGTGAT GCATTTAACG AACAGGAATT TATTACAACA
AATGCCCGTG TAGTTGAATA TTTGGCCAGA GAAAAAGAAA TCAGAGAGCG TTTAGGACGT
TCTTTAGGAA ACGGAGATCT TGAAGATGTA AAAGCTTTGA TCGAAGAACT TGAAATTGCT
GATCCAGAAA CCGGTTCAAG AAACTGGACA GATGTAAAAC AGTTCAACTT AATGTTTGGA
ACTAAATTAG GAGCTTCTGC AGAAAATGCA ATGGATCTTT ATTTACGTCC TGAAACAGCA
CAGGGTATTT TCGTAAACTT TTTAAATGTT CAGAAATCTG GCCGTATGAA AGTTCCTTTT
GGAATTGCTC AAACAGGTAA AGCTTTTAGA AATGAAATTG TTGCAAGACA ATTTATTTTC
CGTATGCGTG AATTTGAACA AATGGAAATG CAGTTTTTTG TACGTCCGGG AGAAGAAATG
CAATGGTACG AACACTGGAA ACAAACGCGT TTGAACTGGC ATTTATCTTT AGGATTAGGA
AAAGAGAATT ACCGTTTTCA TGATCACGAA AAACTAGCAC ATTACGCAAA TGCAGCAGCA
GATATCGAGT TTAATTTTCC ATTTGGTTTC AAAGAATTAG AAGGAATTCA CTCTCGTACT
GATTTTGACT TAAAAGCACA TGAACAATAT TCAGGAAGAA AATTACAATA TTTCGATCCG
GAATTAAACG AAAACTATGT GCCATACGTA GTTGAAACAT CTGTAGGTTT AGATCGTATG
TTCCTGGCAG TTTTTGCTAC TTCATTACAA GAAGAAACTT TAGAAGACGG TTCTGAAAGA
ACAGTTCTAA AATTACCTGC AGTTTTAGCG CCGACAAAAG CAGCAGTTTT ACCATTAGTT
AAGAAAGATG GATTACCAGA AATCTCAAAG AAGATTATTG AAGACTTAAA ATGGGATTTC
AATGTTTCTT ATGATGAGAA AGATGCAGTA GGACGTCGTT ACAGAAGACA AGATGCATTA
GGTACACCAT TCTGTATTAC AGTAGATCAT CAAACTCTGG AAGACGAAAC GGTAACAATT
CGTCATAGAG ATACTATGAA ACAAGATCGT GTAAAAATAT CTGAATTAAG AGGTATTATT
GAAAACGAAG TTTCGATGAA AAACTGGCTG ATGAAAATGT AA
|
|---|
| Protein sequence | MAKQEDIFKN VVSHAKEYGF IFPSSEVYDG LSAVYDYAQN GVELKKNIRE YWWKSMVQMN
ENIVGLDAAI LMHPTTWKAS GHVDAFNDPL IDNKDSKKRY RADVLVEDFA EKIHQKAQKE
IDKAKARFGD AFNEQEFITT NARVVEYLAR EKEIRERLGR SLGNGDLEDV KALIEELEIA
DPETGSRNWT DVKQFNLMFG TKLGASAENA MDLYLRPETA QGIFVNFLNV QKSGRMKVPF
GIAQTGKAFR NEIVARQFIF RMREFEQMEM QFFVRPGEEM QWYEHWKQTR LNWHLSLGLG
KENYRFHDHE KLAHYANAAA DIEFNFPFGF KELEGIHSRT DFDLKAHEQY SGRKLQYFDP
ELNENYVPYV VETSVGLDRM FLAVFATSLQ EETLEDGSER TVLKLPAVLA PTKAAVLPLV
KKDGLPEISK KIIEDLKWDF NVSYDEKDAV GRRYRRQDAL GTPFCITVDH QTLEDETVTI
RHRDTMKQDR VKISELRGII ENEVSMKNWL MKM
|
|---|
| |